Methanogenium sp. S4BF: L1S32_04805
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Entry
L1S32_04805 CDS
T09590
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03030
DNA replication
mesb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1S32_04805 (fen)
03410 Base excision repair
L1S32_04805 (fen)
03450 Non-homologous end-joining
L1S32_04805 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesb03032
]
L1S32_04805 (fen)
03400 DNA repair and recombination proteins [BR:
mesb03400
]
L1S32_04805 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesb04147
]
L1S32_04805 (fen)
DNA replication proteins [BR:
mesb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
L1S32_04805 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
L1S32_04805 (fen)
DNA repair and recombination proteins [BR:
mesb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
L1S32_04805 (fen)
Exosome [BR:
mesb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L1S32_04805 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
HHH_5
5_3_exonuc
HHH
Motif
Other DBs
NCBI-ProteinID:
WFN35434
LinkDB
All DBs
Position
complement(979908..980909)
Genome browser
AA seq
333 aa
AA seq
DB search
MGVALREVLADYKVPVGWDSLSGTAAIDGNNALYQFLTIIRQPDGTPLMNSEGKVTSHLS
GLFFRTARFLEYGLKPVYIFDGKPPDLKSSTIAKRRELRDRAGTAWVQAKEEGDIAESYK
QARAASRIDEWVISSSKELLSVMGIPFVDAPSEGEAQAAYMVQKGDLDFSVSQDYDSLLF
GVPVLVRNLAVSGKRKFRGRTVVVEPEKLYLSKILEGLKISRENLIEMSILIGTDFNEGI
KGIGPKTALKIVQNDAFRKTLEEKAPDFDPRPVMEFFRSPPVTDAYTISWEKPDESAVRD
LLCSRYEFSEERVDAVLTKMRTTAGQKRLDQWF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgcactacgggaagttctggcagattacaaagtgccggtggggtgggattct
ctctccggtactgcagcgatagatgggaataatgcgctatatcagtttttgaccattatc
agacagccggacggaactccgctgatgaacagtgaagggaaggttacatcgcatctctct
ggcctttttttccggactgcgcgtttccttgaatacgggctgaaaccggtgtatattttt
gatggaaaaccacctgatctgaaatcgtcaaccatcgcaaaaagacgggaattgcgtgat
agagcgggaactgcatgggtgcaggccaaagaggagggggatattgccgagtcctataaa
caggcacgcgctgcttcccgtatcgatgaatgggtgatatccagttctaaggagcttctg
agtgtgatgggcattccatttgtggatgctcccagtgagggtgaggcacaggctgcctat
atggtgcagaagggtgatctggatttttctgtctcacaggattatgattcacttttattc
ggtgtgccggttctggtgagaaatctggctgtcagtggcaaacggaagtttcggggacga
acggttgttgttgagccggaaaaactgtacttatcaaagattcttgagggcctgaagata
tcacgggagaacctgattgaaatgagcatccttatcgggaccgatttcaatgaaggaatt
aaagggattggcccaaaaacagcactgaaaattgtacagaacgatgcattccggaaaact
ctggaggaaaaagcaccggactttgatccgcggccggtgatggaatttttccgttccccg
ccggtgacggatgcctatactatttcatgggaaaaacccgatgaatccgccgtccgtgac
ctgctctgttcacggtatgaattttcagaagagcgggtcgatgcagtcctcacaaagatg
cgcacaacggctggtcagaagagacttgaccagtggttctga
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