Methanogenium sp. S4BF: L1S32_06080
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Entry
L1S32_06080 CDS
T09590
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mesb
Methanogenium sp. S4BF
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesb03400
]
L1S32_06080
Enzymes [BR:
mesb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L1S32_06080
DNA repair and recombination proteins [BR:
mesb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L1S32_06080
Prokaryotic type
L1S32_06080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WFN35664
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Position
1255566..1256894
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AA seq
442 aa
AA seq
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MERRLNDHAPRRGDYLLYWMQASQRAEGNPALEYAVREANRLNKPVAVCFCLDPRGEGRQ
VRHLTFMLEGLREAAEQLAGRGIAFILRDGPPQEVVAALGEEACLVVTDGGYLRGQRRDR
ALLAGTLEAPLIEVEGDVIVPVETASLKEEWSAATFRRRITPHIVPSLAQSNEQEVKVRA
VPGEYESLSLSRPAEIIRTLAPAKDASPAAFTGGITEARRLLTLFAAEKLSRYADERNDP
NKDVLSCMSPYLHFGQISPHEIALRIREAGGKNAAAYLEELIVRRELSMNFVHYNPRYAS
IECLPAWARTTLAEHAGDPREYAYSLHEFEAARTHDPCWNAAQRQMRVTGKMHGYMRMYW
GKKVIEWSASPEEAYRTLLILNNRYELDGRDPNSYAGIAWCFGKHDRAWKERPVFGKVRY
MNAKGLQRKFDTDAYVKAYGGE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggctgaacgaccatgccccccgacggggcgactatctcctttactggatg
caggcctcccagcgggccgaagggaacccggcactggaatatgccgtccgggaggcaaac
cggctcaataagcctgtcgccgtctgcttctgccttgacccgcggggcgaggggcggcag
gtccgccatctgaccttcatgctcgaagggctccgggaagccgcagagcagctggccgga
cggggtattgcgtttattctcagagacggtccgccgcaggaggtggtggcggcactgggg
gaggaggcctgcctggtggtcaccgacgggggctatctccgggggcagcggcgggaccgg
gcccttcttgccggaacactggaggcgccgctcatcgaggtggagggggatgtcatcgtg
ccggtggagacggcctctctcaaagaggaatggtccgcagcgaccttccggcggcggatc
acgccccatatcgtcccgtctcttgcccaaagcaacgagcaggaggtgaaggtgagggcg
gttccgggggagtatgaatcgctctcactcagccgccccgcagagatcatccgaacgctt
gctccggcaaaggacgcctctcctgcggcctttaccggaggcatcactgaggcacgccgc
cttctcaccctctttgcagcagagaagctcagccgctatgcagacgagcgcaatgacccg
aacaaagacgttctctcctgtatgagcccgtacctgcacttcgggcagatttcccctcac
gaaattgccctccgcatacgggaggcaggcggaaagaatgcggccgcatacctcgaggag
ctgatcgtccgcagggagctctcgatgaactttgtgcactacaacccccgctacgcctcc
atcgaatgcctccccgcgtgggccagaacgacccttgctgagcatgccggcgacccgcgg
gagtatgcctattcactgcatgaattcgaggcggcccggacccacgacccctgctggaat
gcggcgcagcggcagatgcgggtgaccgggaagatgcacgggtatatgcggatgtactgg
ggcaagaaggtgatcgagtggtcggcctctccggaggaggcgtatcgcaccctcctgatc
ctgaacaaccgctacgaactggacgggagggacccgaacagttatgccggcattgcgtgg
tgcttcgggaagcacgaccgggcatggaaggagcggccggtcttcggaaaggtgcggtat
atgaacgcaaaggggctgcagcggaagttcgatacggatgcatatgtaaaagcgtacggc
ggggaataa
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