Methanogenium sp. S4BF: L1S32_09980
Help
Entry
L1S32_09980 CDS
T09590
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1S32_09980 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesb03019
]
L1S32_09980 (recQ)
03400 DNA repair and recombination proteins [BR:
mesb03400
]
L1S32_09980 (recQ)
Enzymes [BR:
mesb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1S32_09980 (recQ)
Messenger RNA biogenesis [BR:
mesb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1S32_09980 (recQ)
DNA repair and recombination proteins [BR:
mesb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1S32_09980 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WFN34161
LinkDB
All DBs
Position
complement(2088809..2090896)
Genome browser
AA seq
695 aa
AA seq
DB search
MPLSDATTVLRQYFGYNSLYPYQEEIIRALADGEDVLGVIATGGGKSLCYQIPALLSGGM
TVVISPLIALMKDQVDTLRECGVTAACITSLQDYAERRETEAAIARGEVRVLYVSPERAV
KTEFFSLLRKGQVTLIAVDEAHCISQWGHEFRPEYRELARLIREFPQAPVVALTATATPA
VQTDIIAQLHLRRPRQVTGSFYRKNLRYEVRPKKDTRGAILSYLRDHRDQAGIIYCLSRK
GVEDLAATLHRSGIRVLPYHAGLTRQAREAAQEAFVRDRVQVIVATVAFGMGIDKPDVRF
VIHHDLPRSLEHYYQETGRAGRDGDPADCILFYSPGDLHRQAFFIRQESSAARQRAEYTK
LEDMAAYCEEHRCRQAMILQYFGEELPPGGCGACDVCCSPRERFDGTVVARAAITCVQNL
EVPCGSSHLTDLLRGANTKKIRELGQEDTPGYGAGKRYSKDEWRSFIRELIRLGYLERES
GTYPVLRVGEAGRELLAMGNSAESVILTRKKEVQTRQEEPQDPVFLRLKGLRREIADREG
IAPYMIFSDATLRAMATLRPDSDAAFLSIKGVGAAKLKRFGPEFMAALKPADTGADGSVS
ETLRLFRAGCTMAEIAERRSLTPDICGAHLAEAIENGEPVEIDDLVPPHRQAAIREAAAQ
EGTADLRRLKAVLGERFTYTDIRLTCAMDRRYAGR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttctgatgccaccacagtcctgaggcagtacttcggatacaactccctgtac
ccatatcaggaggagatcatccgtgcccttgcagacggggaggacgtcttgggcgtgatt
gcaaccggcgggggaaaatccctctgctaccagataccggcactgctctccggcggtatg
acagtcgtcatatcaccgctgatcgccctgatgaaggatcaggtggacacgctccgggaa
tgcggggtgactgcagcctgcatcacctcactgcaggactacgccgaacggcgggagact
gaggcggcaatcgcacggggggaggtgcgggtgctctatgtatcccccgaacgggcggta
aagacagaattcttctcccttctgaggaaggggcaggtcacccttattgcggtggacgag
gcacactgcatatcccagtggggccatgagttccggccggaataccgggaactggcccgc
ctcatccgtgaatttccccaggcacctgtggtggcgctgacggcaaccgccacccctgcc
gtgcagacagatatcatcgcacaactccacctccgccgtccccgacaggtaaccggaagc
ttctaccgcaaaaatctccggtatgaggtcaggccgaagaaggacaccaggggagcaatt
ctctcctatctccgggaccaccgggatcaggcaggaatcatatattgcctttcccgcaaa
ggcgtggaagatctggcggccaccctccaccggtccgggatccgtgtcctgccctaccac
gccggactcacccggcaggcacgggaggcagcacaggaagcatttgttcgcgaccgggtg
caggtcatcgttgcaacggtcgccttcggtatgggaatcgacaagccggacgtgcgcttt
gtcatccatcacgaccttccccggtcgcttgagcattactatcaggaaacagggagggcc
gggagggacggtgacccggcggactgcattctcttctattcgcccggcgacctgcaccgg
caggcattctttatccggcaggagtcatctgccgcccggcagcgggcggaatatacgaag
cttgaggatatggccgcgtactgcgaggagcaccgttgccgtcaggcgatgattctgcag
tatttcggcgaggagctcccgccgggcggatgcggtgcctgtgatgtctgctgctctccg
cgggaacggttcgacggcacggtagttgcccgggcagccatcacctgtgtgcaaaatctg
gaggtcccctgcgggagcagccacctcaccgatctgctccgcggggcgaatacaaagaag
atccgtgaactgggacaggaggatacccccggatacggggcaggaaagagatattcaaag
gatgaatggcgttcctttatccgtgaactcatccgtctcggctatttggaacgtgagagc
ggcacctatccggtgctcagggtgggggaggcaggcagggagcttttggccatgggaaat
agtgcggaaagcgtcattctaacccggaaaaaagaggttcagacccggcaggaagagcct
caagacccggtcttcctccggctgaaggggctgaggcgggagattgcagacagggagggg
attgccccgtatatgatcttctctgatgcgacactccgggcgatggccacgttacggccg
gacagcgatgcggcatttctttccatcaaaggggtgggcgccgccaaactgaagcggttt
ggcccggaattcatggcggcgctgaaacccgcagataccggagctgacgggtcggtgtca
gagacgctgcgcctcttccgtgccgggtgcacgatggcagagattgcagagaggcgatcg
ctcaccccggatatctgtggcgcccatcttgctgaggcaatcgagaacggggagcccgtg
gagatagacgacctcgtgcccccccaccggcaggcagccatccgggaggcagcggcacag
gagggaacagcagatctccggcggctgaaggctgtgcttggcgagcggttcacctatacc
gatatccggctcacctgtgccatggaccgccgatatgccgggcgatag
DBGET
integrated database retrieval system
