Methanogenium sp. S4BF: L1S32_10920
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Entry
L1S32_10920 CDS
T09590
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
L1S32_10920 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesb03019
]
L1S32_10920 (prf1)
03012 Translation factors [BR:
mesb03012
]
L1S32_10920 (prf1)
Messenger RNA biogenesis [BR:
mesb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
L1S32_10920 (prf1)
Translation factors [BR:
mesb03012
]
Eukaryotic type
Release factors
L1S32_10920 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
WFN34339
LinkDB
All DBs
Position
2277712..2278983
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AA seq
423 aa
AA seq
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MAEEVEMDSARKRYEFKKTLERLKQKEGSGTELITIYIPPDKQIYDVTAQLRDEFGQCSN
IKSKQTRTNVQSAISSILSRLKYYNKPPENGLAIFCGAIKIGGDRTDMDCTIIEPPDVVP
LYMYRCSSRFELEPMEQMLVEKEVYGLLVIDRRESYLGFLRGNRIEPASGVTSTVPGKQR
KGGQSAMRFQRLRLIAINEYYKKVADRATDVFMAEPDFYNRFKGVLIGGPTPTKEEFADG
GYLHHELQKRLIGLFDVSYTNESGLSELVDNAQEALRGVEVMKEKSVMDRFLKELIKDDS
ASAYGEESVRKNLEIGAVDTLLLSENLRKERLRVRCQNCDFVKEETVQVEPGKSAIDIDL
GSCPSCTAPLYLEEETDIIDELTALADASSTRVMIISNDFEEGSILYNAFGGIAAILRYR
TGY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagtggagatggacagcgcccgaaagcgctatgagtttaaaaagaccctt
gaacggctgaagcagaaagagggcagcggaacggaactgattaccatatacatccctccc
gacaagcagatctatgatgtcactgcccagctgagggacgaattcgggcagtgttccaat
attaagagcaaacagacacggacaaatgtgcagagtgccatctcctcgattctctcacgc
ctgaagtattacaataaaccgccggaaaacggccttgccatcttctgcggggcaatcaaa
ataggcggtgaccgtaccgatatggactgcaccatcatcgaacctcctgatgtcgtgccg
ctttatatgtaccggtgctcatcgcgcttcgaacttgagccgatggagcagatgctcgtg
gagaaggaagtctacgggcttctggtcatcgaccgccgtgaatcatatctcggatttctg
cgcggaaaccgcattgagcctgcctccggtgtgacatccacagtccccggcaaacaacga
aaaggtggacagtcagcaatgcgtttccagcgtctgcgcctcattgccatcaatgaatat
tataagaaggtcgctgaccgggcaaccgatgtcttcatggcagaaccggacttctataac
cggttcaaaggcgttctcatcggtggtcccacgcccactaaagaggagtttgcagacggt
ggctatctgcatcacgaactccagaaacggcttatcggtctctttgatgtgtcgtacacc
aatgagtccggtctgagcgaactggtggataatgcacaggaagcgctccgcggcgtagag
gtgatgaaggagaagtctgttatggaccggttcttaaaggaactgatcaaagatgacagt
gcctccgcatacggagaggagtctgtacgcaagaacctcgaaattggtgcggttgatacg
cttcttctttcagagaaccttcgcaaagaacggcttcgtgtccggtgccagaactgtgat
tttgttaaggaagagaccgtgcaggtagagccaggcaagtctgcaattgatattgacctg
ggcagctgcccgagctgcactgcaccgctttacctggaagaagagactgatatcatcgat
gagctgacggcacttgccgacgcaagctcgaccagagtgatgatcatatccaatgatttt
gaagaaggatcgattctttataacgcctttggcgggattgcggctatactgcgatacagg
acaggatactga
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