Methanogenium sp. S4BF: L1S32_11400
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Entry
L1S32_11400 CDS
T09590
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mesb
Methanogenium sp. S4BF
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesb03016
]
L1S32_11400 (truA)
Enzymes [BR:
mesb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
L1S32_11400 (truA)
Transfer RNA biogenesis [BR:
mesb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L1S32_11400 (truA)
Prokaryotic type
L1S32_11400 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WFN34429
LinkDB
All DBs
Position
complement(2376978..2377766)
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AA seq
262 aa
AA seq
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MRLAFQVAYIGTNFYGSQMQPGLRTVEDTLISACRDLGLFDDWRTAGFAFSGRTDRGVHA
RGQICAFTTSLPDRARERLNYILPGDCWCSGWAETAETFHPRFDAESRTYRYYIHDDGST
DLSLMQKAAELLPGTHNFTHFSRLDGKNPEKTILSSEVRAEDGFYVYEIMAPGFLWNMVR
CIVTALIAVGRNELDTDDLTALLTGAPNMRHLTPAPPEGLILWDIDCGIAFTPLESSDRM
IYAFRERNRFFETMKKVNMLLD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggcatttcaggttgcgtacatcgggacgaatttttacggctcacagatgcag
cccggccttcgtaccgtggaggatacgctcatcagcgcctgccgggaccttggcctcttt
gacgactggcgcacagccggatttgcattctccggcagaaccgacagaggcgtccatgca
cgggggcagatctgtgcatttaccacctcccttcccgaccgtgcacgggaacgcctgaat
tatatccttccgggtgactgctggtgcagcggatgggcagagacagcagaaacctttcac
ccgcgatttgatgcagaatcacgcacctaccggtattatattcacgatgacgggtcgaca
gacctttccctcatgcagaaggcagcagaactccttccggggacgcataatttcacccat
ttctcccgccttgacggaaaaaaccctgagaagaccatcctttcatctgaagttcgtgct
gaagacggattttatgtgtatgaaatcatggcaccgggatttctctggaatatggtgcgc
tgcattgtaacagccctcatcgccgtgggcagaaatgaactggacacagacgacctgaca
gcactgctcacgggagcgcccaacatgcgccacctcaccccggccccgccggaagggctt
attctctgggatatcgactgtggcattgcattcaccccgcttgagagcagcgacagaatg
atatacgcattcagagaacgaaaccgattctttgaaacgatgaaaaaagtgaatatgctt
ctggattag
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