Methanogenium sp. S4BF: L1S32_11795
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Entry
L1S32_11795 CDS
T09590
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mesb
Methanogenium sp. S4BF
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesb03016
]
L1S32_11795
Enzymes [BR:
mesb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
L1S32_11795
Transfer RNA biogenesis [BR:
mesb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L1S32_11795
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
DUF5926
Motif
Other DBs
NCBI-ProteinID:
WFN34504
LinkDB
All DBs
Position
complement(2456963..2458453)
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AA seq
496 aa
AA seq
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MMKRQEVDLVAIALDTMERFNFNPEFPRSVLKEVNAITAEFQEGEGDTRDLRSLLWSSID
NFDSMDLDQIEYCKEGENGEIEVKIAIADVDVYVPKHSETDRYAAYNGTSVYTGIVTFPM
LPDRLSKGISSLLPGQDCRAVVIEYTVLPDGSTRHGEIYRAIVANKAKLIYEEVGEWLEE
TREIPPSVRDVPELEAQIRLQHEAAQRLRRSRMEHGALDLRTIEPEPVVEEGRVRDLVIQ
RQDLARQVIEEFMVAANGTTVAFLEEAGLPMIERVVVTPKYWDEIVDTAAEYGWKLSKHP
DAKSLSLFLKNELERSPETFPDLSLTIVKLMGPGEYMARDPRKKPVGHFGLAVTDYTHST
APNRRYADLIIQRLIKSVLDRKECPYTFEDLEEDAEWLSERDKGSKKVERFMRKAEAAVL
LQDRIGETFEAFVTGASERGTYVRLITPAVEGRVMRGEGCLKVGHKVMVRLIHTDPYNGY
VDFECTAKRPGVRRFG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgtcaggaagttgatctcgtcgccatcgcactggatacgatggagagattt
aattttaatcccgaattcccccggtccgttcttaaggaagtaaatgccatcacagcggag
tttcaggaaggagaaggagatactcgagacctccgctctctcctctggtcgtccatcgac
aattttgactccatggatctcgaccagattgagtactgtaaagagggggaaaacggcgaa
atagaggtaaagatagccatcgctgacgtcgatgtgtatgtcccgaaacattcggaaaca
gaccggtatgccgcctataacggcacctcggtctataccggcattgtcaccttccccatg
cttcccgaccggctttccaaaggcatctcctcccttctgcctggacaggactgcagggcg
gttgtcatcgagtacaccgttctcccggacggaagcacccggcacggagaaatctacagg
gccattgtcgcaaacaaggccaaactcatctacgaggaggttggggaatggctggaggaa
acccgcgaaatccctccgtctgtccgggacgtgccggaactcgaagcgcaaatccgtctg
cagcacgaggcagcacagcgcctgagacgcagccgtatggagcatggcgcccttgacctc
aggaccattgagccggagccggtggtcgaggaaggccgggtcagagaccttgtgatccag
cgtcaggaccttgcccggcaggtgattgaggagttcatggtcgcagccaacgggacaacg
gttgcattccttgaagaggccggactgcccatgatcgaacgggttgtcgtcaccccgaaa
tactgggatgaaattgttgacaccgcagcggaatacggctggaaactgtcaaaacatccg
gatgccaaatcactctccctgttcctgaaaaacgaactggagagaagccccgaaacattt
cctgatctctcactgaccatcgtcaaactgatggggccgggggaatacatggcccgcgat
ccacgcaaaaaacccgttggccacttcggacttgcggtcactgactacacccattcaact
gcaccaaaccggcgatacgcagacctcatcatccagcggcttataaaatcggtccttgac
cggaaagaatgcccgtataccttcgaagatctggaggaggatgcggaatggctatccgaa
cgggacaaaggctccaagaaggtcgaacggttcatgcgcaaggcagaggcggccgtgctt
cttcaggacagaatcggggagacattcgaggcctttgtcaccggcgcctcggaaaggggt
acatatgtcaggctcatcaccccggccgtggaaggcagggtgatgcggggcgaagggtgc
ctgaaagtgggccataaagtcatggtgcgcctcattcacacagatccgtataacggatat
gtcgattttgaatgcaccgcgaaacggccgggtgtacgaagattcggataa
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