Manihot esculenta (cassava): 110599661
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Entry
110599661 CDS
T05761
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110599661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110599661
Spliceosome [BR:
mesc03041
]
Common components
Common spliceosomal components
SR proteins
110599661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110599661
NCBI-ProteinID:
XP_021591857
LinkDB
All DBs
Position
14:complement(26174944..26179523)
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AA seq
257 aa
AA seq
DB search
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRIVESVPRSRHRSRSR
SPRRRYRDDYKDKDHKKRSRSRSLDRYERDKNRGRDRDYRRRSRSRSASPDYSRGRGRGR
YDDERRSGSRSADSASPVRRSPSPQRSSSPRKNSPPKAESPDRRSRDDRSPTPRSASPRG
RHAASRSPSPRNSDVDE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggcaggtctggccctccggatatctctgacacctactctctccttgtc
ctcaacatcaccttccgtactactgctgatgatttgtttccgctttttgacaagtacggg
aaggtagttgacatcttcatccccagagatcgaaggactggtgactctcgtggctttgca
tttgtgcgctacaagtatgcggatgaggcacaaaaggcagtggataggctagatggaaga
gttgttgatgggcgtgagataacagttcagtttgcaaaatatggacccaatgccgagagg
attcataaaggaaggattgtcgaatctgttccaaggtcaaggcacagatcacggagccgt
agtccccgaagaaggtaccgagatgactataaagataaagaccataagaagagaagtcgt
agcaggagtttggacaggtatgagcgtgacaagaatcgtggaagggacagagactatcgt
cgtcggagcaggagtcgcagtgccagtcctgattactctagaggacggggtagaggacgt
tatgatgatgagcggaggagtggcagtcgatcagcggatagtgcatcccctgttagacgt
agtccaagccctcaaaggagttcttccccccgcaagaattctccccctaaggctgaaagc
ccggatagacgcagtcgtgatgatcgttccccaactccacgaagtgcctcgcctagaggt
cgacatgccgcctctcgtagcccatccccacgaaattcagatgttgatgaatga
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