Manihot esculenta (cassava): 110599691
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Entry
110599691 CDS
T05761
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110599691
03036 Chromosome and associated proteins [BR:
mesc03036
]
110599691
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110599691
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Helicases
110599691
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110599691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
110599691
NCBI-ProteinID:
XP_021591916
LinkDB
All DBs
Position
14:complement(2841276..2847707)
Genome browser
AA seq
698 aa
AA seq
DB search
MPSIALANNSSDSKDKKEKKMKKKIALETSEPQDEIFSDKKQKKKDKKKRKAMEIDSEDE
ERSETSSELVEPVNLKSEKTKKNKKAKLAEEDDEGEGEVAKAEDPNAISRFRISGPLREK
LKSKGIESLFPIQARTFDDVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKASRKTG
YGRPPSVLVLLPTRELASQVYDDFKVYGEALGLVSCCLYGGASYHPQEMSLKRGVDIVVG
TPGRIKDHIERGNIDLSLLKFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSAT
LPDWVKHISSRFLKSTKKTIDLVGNEKMKASTSVRHIVLPCFTSAIPQLIPDIIRCYSSG
GRTIIFTEKRESANELAGLLHGARALHGEIQQSQREVTLSGFRSGKFMTLVATNVAARGL
DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIQRESGVKFEH
ITAPKPADIAKAVGVEAAEKITEVSDSVVPAFKSAAEDLLNNSGLSAVELLAKALATAAG
YTEVKSRSLLTSMENHVTLLLEAGKPIYTPSFAFGMLRRFLPEDKIDSSVKGMTLTADGN
GAVFDVPAADLDAFLAGQENAANVSLEVLQALPPLQERDQSRGRFGGGGGGRGRGGFSDR
SGGSRFSGGKGGRGGGFSDRRNDRFSNGFGGRRNGKKW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccatccatagctctagccaataactcctcagattctaaagacaagaaagagaagaag
atgaagaagaaaatagctttggaaacctcagagccccaggatgagatcttttctgacaaa
aagcagaagaagaaagataagaagaagcgaaaagctatggaaattgactctgaagatgaa
gagaggagcgagacgagttcggagcttgtcgagcccgttaatttgaagtcagagaaaaca
aagaagaataagaaggcaaagttggctgaggaggatgatgagggagagggagaggtagcg
aaggccgaggatcccaacgctatatcgaggtttcgcatatccggcccccttagagagaag
ctcaagtctaaagggatcgagtcgttgttcccaattcaggccagaaccttcgatgatgtt
ctcgacgggtctgacttggttgggcgcgcacggactggtcagggtaaaactctggctttt
gtgttgcctattttggagtctcttacaaatgggcctgcaaaggcatcaagaaagaccggg
tatggcaggcctccaagcgttctggttcttctacccaccagggagttggccagtcaggtg
tatgatgacttcaaagtttatggtgaggcattgggcttggtatcttgctgtttgtatgga
ggagcttcataccatcctcaggagatgagcttaaagagaggggtggatatagttgttgga
acaccaggccgcataaaggatcacatagagaggggcaatattgacttaagcttgcttaag
ttccgagtccttgatgaggcggatgaaatgttgaggatgggttttgttgaggatgttgaa
cttattcttggaaaagttgaggatgtaagcaaagttcagactcttctcttcagtgccacc
ttgccagattgggtgaaacatatctcttctagatttctgaaatcaactaagaaaaccata
gatcttgttggtaatgagaaaatgaaagctagtaccagtgttaggcatattgtgcttccc
tgttttacttcagcaatacctcagcttattcctgatataattcgttgttatagcagtgga
ggccgtacaattattttcaccgagaaaagggaatctgcaaatgaacttgctggtttgttg
catggagctcgggctttacatggggagatacaacaatctcaacgtgaggtcaccctttct
gggttcaggtcggggaaattcatgacattggtagccacgaatgtggcagcccgtggactg
gatataaatgatgtgcaattaattatccagtgtgagcctcctcgtgatgtggaagcttat
atacatcgttctggacgcactggaagggcaggcaatactggagttgctgtaatgctctac
gatccaaggaggtccaatatatcaaagattcaaagagaatctggtgtgaaatttgagcat
attactgcccctaagcctgctgatattgccaaagctgttggggtggaagcagctgaaaaa
ataaccgaggtttctgacagtgtggttcctgcattcaagtctgcagcagaggatctgttg
aataactctggtctgtcagcagtagaattacttgcaaaagcccttgccacagctgctggt
tacaccgaggtaaagagcagatcacttctgacatctatggagaaccatgttacgttgctc
cttgaagctgggaaacccatctacacaccatcatttgcttttggcatgttgaggagattc
ttgccagaggataagatcgactcatcagtgaagggtatgactctcacagccgatgggaat
ggtgctgtgtttgatgtgcctgcagcagatctagacgcatttcttgctggtcaggaaaat
gcagctaatgtcagcttagaagttctacaagcattgcctcccttgcaagaaagggaccaa
tcaaggggaagatttggcggtggtggtggtggtcgaggtcggggtggcttcagtgacagg
agtggtggtagtaggttctcggggggcaaaggtggcaggggtgggggattttctgataga
agaaatgataggttctctaatggctttggcggtcgcaggaatggcaaaaaatggtga
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