Manihot esculenta (cassava): 110599796
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Entry
110599796 CDS
T05761
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
mesc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110599796
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110599796
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110599796
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110599796
03036 Chromosome and associated proteins [BR:
mesc03036
]
110599796
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110599796
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110599796
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110599796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
HEAT_EZ
Vac14_Fab1_bd
Adaptin_N
Cnd1
TAF6_C
CLASP_N
TPR_TNPO3_IPO13_3rd
RH1
Motif
Other DBs
NCBI-GeneID:
110599796
NCBI-ProteinID:
XP_021592056
LinkDB
All DBs
Position
14:complement(8258378..8265000)
Genome browser
AA seq
590 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDMLKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVESAHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELATQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQL
MQVLEMINNPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVINASKDRVPNIKFNVAKV
LQSLIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFANQALQAIDNVMMSS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgagcccctatatccaatagctgttctcatagacgagctaaaaaat
gatgacatccagctccggctgaactcaatccgtagactgtctactattgctcgtgctctt
ggggaggagcgaacccggaaggaactaatcccatttctgagtgaaaacaatgatgatgat
gatgaggttctccttgcaatggctgaggaattgggagtgttcatcccttatgttggggga
gttgagcatgcccatgttttgctgccacctttggaaacactttgcactgtggaggaaaca
tgcgttcgagataaagctgtggagtccttgtgtaggattgggtcccagatgagggagagc
gacttggttgattggttcattcctctggtcaagagactggctgctggagaatggtttaca
gctcgagtttctgcatgtggactctttcatattgcctatccaagtgcccctgatatgtta
aagacagaattgcgttcgatatacagccagctctgtcaagatgacatgccaatggttaga
aggtctgcagcctcaaatctgggaaaatttgctgcaactgttgaatctgctcatttgaag
actgacatcatgtcaatatttgaggatcttacccaggatgatcaggattctgttcgttta
ttggctgttgagggttgtgctgctcttggaaaattgttggagccccaggattgtgttgca
catattctccccgttattgttaacttctcccaggacaagtcttggcgtgtacgctacatg
gttgcaaatcaattatatgaactttgtgaagctgtggggcctgagcctactaggacggaa
ttagttcctgcatacgtgcgcttacttcgtgataatgaggctgaagtacgcatagcagct
gctggaaaagtaaccaagttctgccgcattttaaatccagaacttgcgactcagcacatt
ctcccctgtgtaaaggaactttcatcagattcttcccagcatgtccgatctgctttggct
tcagttataatgggaatggctcctgtcctggggaaggatgctacgatcgagcagcttcta
ccgatttttctatcccttttgaaggatgagtttcctgatgtgcgcctcaacataatcagc
aagcttgatcaagtgaatcaggttattggaattgatctactgtcacaatcattattgcca
gccattgttgagcttgctgaggatagacattggagggttcggcttgcgatcattgagtac
attcctttattggctagtcagttgggtgttgggttctttgatgataagcttggcgctctt
tgcatgcagtggttacaagataaggtttactcaattcgtgatgctgctgcaaataattta
aagcggcttgctgaagaatttggtcctgagtgggcaatgcagcacataattccacagctc
atgcaggtcttggagatgattaacaatcctcactatttgtaccggatgactattttacgt
gctatctcactccttgctcctgttatgggctctgaaattacatgttctaaactgctgcca
gtggttatcaatgcatcaaaagacagggtacccaatattaagttcaatgtagcaaaggtg
ttgcaatccctcattcccatagttgaccagtctgttgtggagaagaccatccgtccctgt
ttggttgaactgagtgaggatccagatgttgatgttcggtttttcgccaaccaagccctc
caggcaattgacaatgtgatgatgtctagctag
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