Manihot esculenta (cassava): 110599838
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Entry
110599838 CDS
T05761
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110599838
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110599838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110599838
NCBI-ProteinID:
XP_043805992
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All DBs
Position
14:4811613..4813490
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AA seq
401 aa
AA seq
DB search
MALTHLFLFSLLTIPSLISSSPVQDPELVIHQVNRAINASRRNLGYLSCGTGNPIDDCWR
CDPNWEKNRQRLADCAIGFGKNAIGGRDGRIYVVTDSGDDDPVNPKPGTLRHAVIQDEPL
WIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLHIHDCKQG
GNAYVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCNDGLVDAIHGSTAITISNN
FMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
YAIGGSAAPTINSQGNRFVAPDDRFNKEVTKYEDAPESEWKNWNWRSEGDLMVNGAFFTA
SGAGASSSYAKASSLSARPSSLVGTITVGAGALSCKKGSRC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactcatctctttctcttttctctcctcaccatcccttctctcatttcctct
tccccagttcaggacccagagcttgtaattcaccaagtcaacagggccattaatgcttcg
aggaggaacttgggctatctctcttgtggaaccggtaacccaattgatgattgctggagg
tgcgaccccaactgggagaagaaccgccagcgcctggcggattgtgctattgggttcggt
aagaatgccattgggggaagagatggaagaatttacgttgtcacagattccggtgacgat
gaccctgtgaaccctaagccagggactctgaggcacgctgtgattcaagacgagccattg
tggatcatatttgctcgtgacatgaccattcagttgaaggaagagctgatcatgaactcg
tttaagaccatcgatggtagaggtgctagcgtccacattgctggtggtccgtgcattact
atacaatatgtgaccaacattattattcatggactgcacatacatgactgcaagcaagga
gggaatgcttatgtgagggactcaccacggcactatgggtggaggactatatcagacggt
gatggagtgtccatctttggtggtagccacgtatgggtggaccataactcattgtcaaat
tgtaatgatggtctagttgatgcaattcatgggtccacagccatcacaatttcaaacaat
ttcatgacccaccatgataaagtaatgttactgggtcacagcgattcctttactcaagac
aagaacatgcaggtcaccatagccttcaatcactttggcgaagggcttgtgcaaaggatg
ccaaggtgtaggcatggatatttccatgtggtcaacaatgactacacccattgggaaatg
tatgccattggaggtagtgcagccccaaccattaacagccaaggcaacagatttgttgca
cctgatgatagattcaacaaagaggtgacaaaatatgaggatgcaccggaaagtgaatgg
aagaactggaattggaggtcagagggagacctgatggtgaatggtgcatttttcacagct
tcgggagcaggagcctcttcaagctacgctaaagcatcaagcttgagtgctagaccctct
tcccttgtcggtaccataacggtgggagcaggcgcccttagttgcaagaaagggtctcgt
tgctga
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