Manihot esculenta (cassava): 110599862
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Entry
110599862 CDS
T05761
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110599862
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110599862
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
Helicases
110599862
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110599862
NCBI-ProteinID:
XP_021592142
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All DBs
Position
14:526937..530746
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AA seq
498 aa
AA seq
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MEPEETLVDKNFPLFFKPSKTHKSLQTPVTSKTLNTEQNSEPHQVEKETSANTDSITPST
TATLFSDLGLAEWVVQTCKELGMKRPTPVQAHCIPKILAGHDVLGLAQTGSGKTAAFALP
ILHRLAQDPYGIFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMLTQAKTLMG
RPHIVIATPGRVKVLLEENPDIPAVFSRTKFLVLDEADRVLDVGFEEELRAVFQCLPKQR
QTLLFSATMTSNLEMLLELSANKAYFYEAYEGFKTVDTLKQQYVFIPKNVKEVYLVHLLS
KMEDMGIRSAMIFVSTCRTCHLLSLLLEELDQEAAALHSFKSQSLRLSAVHRFKSGQASV
LVATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAVSFVTENDVDLIH
EIEAVIGKQLEEFECKEKDVLSDITRIYKAKRVATMKMMDDGFEEKAKGRKEQKMKTLAE
KGLLKKKSGKRKRQKFAK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggagccagaagaaactttggttgacaaaaactttccccttttcttcaaaccttccaaa
acccacaaatcccttcaaacccctgtaacttctaaaaccctaaacactgaacaaaattcg
gaaccccatcaagtcgagaaggaaacatctgcaaacactgattccatcaccccctccacc
accgcaacgttattttccgacctgggtctcgccgaatgggtggtccaaacctgcaaggag
ctggggatgaaaaggcccactcccgtccaagcccactgcatcccgaagattttagcgggt
catgacgtgctggggttggctcagaccggcagtggcaagacggcggcgtttgcgctgccg
atcttgcatcgcctggcgcaggatccatacgggattttcgcgttggtggtgactcctact
agagaattggcctatcagttggcggagcagttccgtgccctggggtcttgcttgcattta
cgatgtgcggtggtggttgggggtatggatatgttgacccaggccaagaccttaatgggc
agaccgcatattgttatcgccacgcctggaagggttaaggttttattggaggagaatccg
gatatccctgctgtcttctctagaaccaagttcctagttctggatgaagctgatagagtt
ttggatgttggatttgaagaagaattaagagcggtgtttcaatgcttaccaaaacaacgg
caaacactgttgttttctgcaacaatgacaagtaacttggaaatgctacttgagctttct
gcaaataaggcatacttctatgaagcctatgaaggcttcaagacagttgacactcttaaa
cagcagtatgttttcatccctaagaatgtgaaggaggtttatcttgttcaccttttgtct
aaaatggaagatatgggtattcgatctgctatgatatttgtctctacctgcagaacttgt
caccttttgagtttattgctggaagagcttgatcaggaagcagcagcattgcattcattt
aaatctcaatctttgagactttctgctgtacatcgtttcaaatctggacaagcttctgta
ttggttgcaactgatgttgccagtcggggtttggacattcctactgttgatcttgttatc
aattatgatattccaaggtatcccagagattatgttcatcgtgtaggtcgtactgctaga
gcaggtagaggagggctggctgtgagttttgttactgagaacgatgtggatctcattcat
gagatagaagctgttattgggaaacaactggaggaatttgagtgtaaagagaaggatgtc
ctttcagatattaccaggatatacaaagccaaacgtgtggcgacaatgaagatgatggat
gatggatttgaggagaaagcaaagggtcggaaagagcaaaaaatgaaaactctagcagag
aagggattgttgaagaagaagagtggaaaaagaaagagacaaaagtttgcaaaatag
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