Manihot esculenta (cassava): 110599947
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Entry
110599947 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110599947
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110599947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
110599947
NCBI-ProteinID:
XP_021592279
LinkDB
All DBs
Position
14:11767006..11790602
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AA seq
1974 aa
AA seq
DB search
MWTNVFRIGGLHQVSWFQFLPNESDLNSLLDKSVKLEQKDAATWLVLWSHLQLQKDGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSTVVEKAQAAVSRLRVVASGIWVAPGD
NEEVAVALSQSLRNCIEKALVGLSYMRFGDVFSKHHPSQSEGLFRRQPTVEFIFAATEEA
IFVHVRISAKHIRPLATGDIERVSKYSANNSGYRLPVIVAPHGMRGWLTGCCPNDLVKQV
YFSSSGKFRTSNGFIGIPNHFSQGHGCLLRGKNCYVEVTLGCPRSENEKGLQSNSHSIRN
LPKNHVVESPAVGRGDHKGSSVQTSLHEKAFIYPAEAVVVPVLQTSFARSSLKRFWLQNW
IGPSLPGSSFFMHCGGDIDNIEGSWIESNGMQHGYNSSSNSNSSSIGSISSSSSDSDRRM
TMEGGDLEADADSLSCRQSGLSSNDHLENDGPKLGSKRPHTGVAESFGQMGTIKNASMQD
VYKSDFGSFDVGNSAITGVANEQIGSHLDWDDDDRGMGINIQALLSEFGDFDDFFENDAL
PFGEPPGTAESQALMFSAPDCGEVVSSPIGVMDVADHMLLPVGFSSFESFNPPPTGVLEE
CMSKSQEIPIDALTSLPVNHIPPSSAGEFDHLIKAEALMSFAPEYGAVETSTSEFSSSIF
RSTYCPKSRKVESSNSSTNNYTYSATPPSSPCLDGSDEKSGMPVNAKAGVRMDIKKYYTH
VETVREQPNRKSVTQSEGLATSEGLVPSSFSTFNSTNVVKSVQRKMAEATVGSENFLLSL
KTVLATEVECLMFQATMCRVRHVLLSSCNPAPISLSRLSSSTVLSELPGDGSTMTDNISS
RYEVKKKESIPVRIAGDIDGVLDGHLNAPVGVWRSVSVPKVAKPSSSPSIEVSQSLPHHS
LNEERMLSYKHRQPLQELLDGMALLVQQATSFVDVALDADCSDGPYGWLALQEHWRRGFS
CGPSMVHAGCGGTLASCHSLDIAGMQLVDPLSSDIHASSVISLLQSEIKTALKSAFENLD
GPLSVTDWCRGRSQSGDGGIACDGSLAESTLSECKDSSSTVCLSVGEPMSPAQSSAGASS
CLKVAAVDGAKADDSGQRRLSQEIESDQLSCSRRPSLFVLPSPAILVGYQDDWLKTSASS
LQLWEKAPFEPYASPKPISYCVICPDIDPLTSAAADFFQQLGTVYEICKLGTHQPQSLGN
QMEIDSGKLSTSGFVMLDCPQSMKIESSNTSLVGSISDYFLSLSNGWDLTSYLKSLSKAV
KSLKIGPCVSTNTKEGNSGPCMVIYVVCPFPEPIAVLQTIIESSVAVGSTILPSDRERRP
LLLSQVGKALSSSAVVDEASASNVLVLSGFNVPKLVLQIVTVDAIFRVTSPALNELVILK
ETAFTVYNKARRISKGSSYDIQSSTLSSRSHPVMAQMTSIPAMWKDCVGPRLGGPSLPRE
GEIDAGLRPGTWDNSWQTTRAGGLNCDPNRNGDLFHQDEIHYMFEPLFILSEPGSLEHAA
APAVFSNLTAESSKLLSDDSSGGFMQSGSSAVSADAGSGSQLDGLEPDGFGGSYQKTLPS
LHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQIL
QACSSHDIGSAKPRDFVITRIGNFFELECLEWQKAIYSVGGSEVKKWPLQLRRSMPDGMS
ASSNGATLQQQEMSLMQERTLPSSPSPMYSPHSKGSGFMKGGLGQSSARKQLIGGHTVDN
SRGMLQWVQSISFVAISIDHSLHLVYQADSTSPGGTQGSNGVGAYLEGFTPVKSLGSSSA
SYILIPSPSMRFLPSTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRKD
YRSNSREEWPSVLSVSLIDYYGGNNITQEKISRGIMKQGPRPLSSEVRDFEIEIHLILES
LAAELHALSWMTVSPAYLERRTALPCHCDMVLRLRRLLHFADKELSSQPDKSQM
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgttttcagaattggaggccttcatcaggtatcatggttccagtttctc
cctaatgaatctgatttgaactctctactggataagagtgtaaagttagagcagaaagat
gctgctacatggcttgtgctttggtctcatttgcagttgcagaaagacggatttctcagt
acatggacgaattcctttgttggaccttgggatccatctcagggtttgcacaatcctgat
gagaaaataaaactatggctttttcttcctgggcgtcattctactgttgttgagaaggct
caagctgctgtgtctagattaagagttgttgcctctggaatttgggtggcacctggggac
aatgaagaagttgctgtggccctttcacaatcgttaaggaattgtatagaaaaagctctt
gttggactttcttacatgagatttggagatgtgttttcaaagcatcacccgtctcaaagt
gaaggcctcttcaggagacaacctacagttgagttcatctttgctgctactgaggaggca
atatttgtgcatgtcagaatatctgcaaagcatatccgtccacttgcaactggtgacata
gaaagagtctcaaagtattctgctaataattctggttacagacttccagtcatcgttgct
cctcatgggatgcgcggttggctcacaggatgttgtcccaatgatcttgtcaagcaagta
tatttcagcagttctggcaagtttaggacatcaaatggatttataggtataccaaaccat
ttttctcaagggcatggctgcttgctgagggggaagaattgctatgttgaagtgacactt
ggttgtcctagatcagaaaatgagaagggattgcaatccaactcacattcaatcagaaac
ttacctaagaatcatgttgtggaatctcctgctgttggaagaggtgatcataagggatct
tcagttcaaacatcgttacatgagaaagcatttatctatccagcagaggcagtagttgtt
ccagtcttgcaaacatcttttgctagatcatctctgaaaagattttggctccaaaattgg
atagggccatcattgcctggttcatctttcttcatgcattgtggcggtgatatagataat
atagaaggatcttggatagaatctaatggcatgcagcatggctataacagtagtagcaat
agtaatagtagcagtattggctccataagcagcagttctagtgatagtgatcgcagaatg
accatggaaggtggtgatcttgaggcagatgctgattcattatcatgtagacaatcgggt
ttatcgtctaatgatcatctggaaaatgatggccccaaattgggttctaagcgtcctcat
acaggggtggcagagtcatttggtcaaatgggcaccataaaaaatgcttctatgcaagat
gtgtacaagtctgattttggttcttttgatgttggcaattcagccatcacaggggttgca
aatgagcagattggatctcatttagattgggatgatgatgatagaggcatggggattaat
atccaagctcttctgtctgaatttggtgattttgatgacttctttgagaatgatgccttg
ccttttggagagcctcctggaacagcagagtcgcaggctcttatgttttctgctccagat
tgtggagaagttgttagcagccctattggggtaatggatgttgcagatcatatgcttttg
cctgtaggtttttcatcctttgagagctttaatccacctcctacaggagtcctagaggag
tgcatgagcaaaagtcaagaaatcccaattgatgctctcacatcacttccagtgaaccac
ataccgccatcttctgcaggtgagtttgatcatttaatcaaagctgaggctctgatgtcc
tttgctccagaatatggggcagttgaaacaagcacaagtgagttctcctcatcaattttc
agaagcacatattgcccaaagtctcgcaaagttgagagttcaaattcaagtacaaacaat
tacacgtacagtgcaacacctccctcttctccgtgcttagatggatcagatgagaagagt
ggaatgcctgtgaatgcaaaagcaggtgtcaggatggatataaagaaatattacacccac
gtagagactgttagagaacaacctaatagaaaatctgtcacacaaagtgagggccttgct
acaagcgagggattggtaccatcttcattctctaccttcaattctacaaatgtcgtcaaa
tcagtgcagaggaaaatggcggaagccacagtaggatcagagaatttcttactttctttg
aagactgtgttggcaactgaagttgaatgtctcatgttccaagctaccatgtgtagggta
cgacatgtactgttgtcttcctgtaaccctgcacctataagcttgagtaggttaagcagc
agcactgttttgagtgaattgcctggtgatggaagtaccatgacagacaatatatctagc
aggtacgaggtgaagaagaaagaatctataccagttaggatagccggtgatattgatgga
gtgctagatggtcacctcaatgcacctgttggagtttggcgctctgtttctgttcctaaa
gtagccaaaccaagcagttcaccaagtattgaagttagtcaatcgttaccccatcattca
ttgaacgaagaaagaatgctttcatataagcatagacaacccctgcaggagctgcttgat
ggcatggcattgcttgtccagcaagccacttcctttgttgatgtggctcttgatgcagat
tgtagtgatggtccttatggttggcttgcattacaagagcactggagacgtggattttct
tgtgggccttccatggtccatgcaggctgtgggggaactttggcttcttgccattccctg
gacattgctggcatgcagttagtagatcctctttcttcggatattcacgcgtcctctgtg
attagcttgcttcaatctgaaatcaaaacagcgctaaaatctgcattcgagaatttggat
ggcccattatctgtcactgattggtgcagaggccgtagtcagtcgggtgatggaggcatt
gcgtgtgatggatctttggctgaatctactttaagcgagtgcaaagattcttctagcact
gtatgtttatctgttggagaaccaatgagcccagcccagtcttctgctggtgcctcttct
tgccttaaagttgctgcagtggatggagctaaagcagatgactctggccaaaggagattg
agccaagaaatagagtcagaccagctttcatgctcccgaaggccatcactttttgttctt
ccttcccctgctatacttgttgggtatcaggatgattggctcaagacatcggcaagctcc
ttacaactctgggaaaaggctccttttgagccatatgcttcaccaaaacctatctcttac
tgtgttatatgtccagacattgatcctcttacttctgctgctgctgattttttccaacaa
cttggaactgtttatgagatctgcaaactgggaactcatcaaccgcagagtttgggaaac
caaatggagatagactcggggaaattgtcaacttctggttttgtgatgcttgattgtcct
caatcaatgaagatagaaagcagtaatacatctcttgtgggttcaataagtgattatttt
ctctctctctccaatggttgggacttgacaagctatcttaagtctctctcaaaggctgtt
aaatccttaaaaattggtccttgtgtatcaacaaacacaaaagaaggaaatagtggtcct
tgtatggttatctacgtggtttgcccctttcctgaacctatcgcagttctgcagaccatc
attgaatcttctgttgctgttggatcaacaattcttccatcagatagagagaggaggcct
ctattgctgagtcaggttggcaaggcgttaagtagctcggcagttgtggatgaagcatca
gcgtcaaatgttctagtactttcagggtttaatgttcctaaattggtcttgcaaattgtg
actgttgatgctatttttagggtcacaagtcctgctcttaatgaacttgtcattcttaaa
gagactgctttcactgtatacaacaaggctcggcgaatttcaaaaggatcctcatatgat
attcaatcatcaacattgtctagtagatctcatcctgtcatggcgcaaatgacttccatt
ccagcaatgtggaaggattgtgtcggtcctcgacttggaggaccttcacttccgagagag
ggtgaaattgatgctggcttgagaccaggtacttgggataactcatggcaaacaacaagg
gctggaggactgaactgtgatccaaacagaaatggagatctatttcatcaggatgaaatt
cactacatgtttgagccactttttattctttcagaacctggttctctagagcatgcagct
gcacctgcagtttttagcaatttaactgctgaatcttcgaagctgttatctgatgatagt
agtggaggcttcatgcaaagtggcagctcagcagtgagtgcagatgctggatcaggctct
caacttgatggattggagccagatggctttggaggtagttaccaaaagactcttccgagc
ctgcattgttgctatggatggacagaggattggcgttggctagtatgcatttggacagat
gcaaggggagaattgcttgacagccatatatttccttttggcggaattagcagtcgacag
gacacaaaggggttgcaatgcctctttgtgcaagttctccagcaaggctgtcagatactt
caggcttgctcctctcatgatattggttctgcaaagcccagagactttgtgattacacgc
attggaaatttctttgagcttgaatgcctagaatggcagaaagctatttattcagttggg
ggttctgaggtgaagaaatggcccctgcaactgcggcgatctatgcctgatgggatgtct
gctagcagtaatggagctaccttgcaacagcaggagatgagtttaatgcaagagagaact
cttccttcctcgcccagtccaatgtatagccctcactcaaaaggttctggctttatgaag
ggtggtttagggcaatcttctgcaagaaaacagcttataggtggacatacggttgataac
tcgaggggaatgcttcagtgggttcagagcatcagttttgttgcaatttccattgaccat
tctttgcatctggtttatcaagcagattcaacatctccaggaggaactcagggtagcaat
ggtgttggtgcatatttggaaggtttcactcctgtaaaatctctcggttcttcttctgca
tcttacattttaataccatcacccagcatgcgctttctcccttcaacacctcttcagctc
cccacatgtctcactgccgagtcaccaccacttgcacatcttctccatagtaagggctct
gcaattcccctctcaactggctttgtggtttccaaagctgtaccttctatgaggaaagac
tacagaagcaactcgcgggaagaatggccctcggttctttctgtgagtctcattgattat
tatgggggtaataacatcacccaagagaaaatctctagggggattatgaagcaaggaccg
cgacctttgagctctgaggttagagacttcgaaattgaaatccacttgattctcgagtct
ttagcagctgaacttcatgccttatcctggatgactgtgagtccagcatatttggagcga
agaactgcactgccatgtcactgtgacatggttttaaggcttagaaggttgcttcatttt
gctgataaagagctctcttcgcaacctgacaagtcccagatgtaa
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