KEGG   Manihot esculenta (cassava): 110599988
Entry
110599988         CDS       T05761                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110599988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110599988
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110599988
Spliceosome [BR:mesc03041]
 Complex B
  Other components
   Prp19 complex
    110599988
 Complex C
   Prp19-CDC5 complex
    110599988
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110599988
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 110599988
NCBI-ProteinID: XP_021592334
LinkDB
Position
14:complement(27319947..27326244)
AA seq 255 aa
MAATGNGEILMLDAPPEASRPWSSSSNSEIVDALPYIDDDYGDPSVKAEVDRLVEEEMRR
SSKKPADFLKDLPSPPKFNFENYPMLAKEYERVRAGRPPVTLDFSRYAHLDLPMANKMND
EAAWKQALQRAQRLLQHQVIRLENLDLISKYGPNVWIQHNRQLEVMLSRMQKLAQEQNEK
IEAVNRERKYHQQNTAYELNALSMQWKELCLKNIEIQAACTKIEMQIEELKKEAAERGWN
LEANIENGSLLHSAQ
NT seq 768 nt   +upstreamnt  +downstreamnt
atggcggctaccggcaacggcgaaatccttatgctggacgcaccaccggaggcctctcgc
ccttggtcgagctcatccaattcagaaatcgtggacgcattaccctacatcgatgatgat
tatggagatccctccgtcaaggcagaggttgatcgccttgttgaagaagagatgcgtagg
agttcgaagaaacctgccgattttttgaaagacttgccttctcccccaaagttcaatttc
gagaattatccaatgcttgctaaagaatatgaacgtgtgagagctggaaggcctccagtt
acacttgatttttcacgatatgctcacttggatttgcctatggctaataagatgaatgat
gaagctgcttggaagcaagcactacagagagcacagcgtttgctacagcatcaagtgatc
aggctggaaaatttagacctaatatcaaaatatggtccaaatgtctggatacaacacaac
cgtcaattagaagtaatgttatccagaatgcagaagttagctcaggaacaaaatgaaaaa
attgaagctgtgaatcgggaaaggaaatatcatcagcaaaatactgcatatgagctgaat
gctttatctatgcaatggaaggagctttgtctcaaaaatatagaaatccaagctgcatgt
actaaaatagaaatgcagatagaggaattgaagaaagaagctgctgagagaggctggaac
ttggaagctaacatagagaatggttctttattacattcagctcaatga

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