Manihot esculenta (cassava): 110600182
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Entry
110600182 CDS
T05761
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110600182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110600182
Membrane trafficking [BR:
mesc04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
110600182
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Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Peptidase_M61
Prefoldin_3
DUF6891
Motif
Other DBs
NCBI-GeneID:
110600182
NCBI-ProteinID:
XP_021592661
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Position
14:12441785..12448384
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AA seq
199 aa
AA seq
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MKITALLVLKCNPDGSDPVILSNASDVTHFGYFQRPSVRQFIVFVGRTVAKRTPPGQRQS
VQHEEYKVHSYNSNGLCAVGFMDDAYPVRSAFSLLNQVLDEYQKNFGDSWRTVQEDNVQA
WSYLNEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacagcgcttttggtattgaagtgcaatcccgatggatcggatcctgtaatt
ttatcaaacgcttccgatgtgacccatttcgggtacttccagaggccaagcgtcagacaa
ttcattgtttttgtcggtcggaccgtagccaaacgcactcctcccggccaacgccagtcc
gtccagcatgaagaatacaaggtacattcttacaatagcaatggcctgtgtgcggttggg
tttatggatgatgcctatcctgtccgaagtgctttttctcttctgaatcaggtgctagac
gagtatcagaagaattttggtgattcatggaggactgtacaggaagataatgtacaagct
tggtcatatttgaatgaagcattgaccaagttccaagatcctgcagaggcagacaagctg
ttgaaaattcaaagggagttggatgagacaaaaataatccttcataaaactatcgacagt
gttcttgctcgaggtgagaaactggacagtctagttgagaagagttcggatctgagtgct
gcttcacagatgttctataagcaggcgaagaaaaccaatcaatgttgtaccatactgtaa
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