Manihot esculenta (cassava): 110600322
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Entry
110600322 CDS
T05761
Name
(RefSeq) chaperone protein ClpC, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110600322
Chaperones and folding catalysts [BR:
mesc03110
]
Heat shock proteins
HSP100
110600322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_18
NACHT
Mg_chelatase
AAA_28
Zeta_toxin
AAA_25
IstB_IS21
Torsin
Mito_fiss_reg
DNA_pol3_delta2
MazE_antitoxin
Motif
Other DBs
NCBI-GeneID:
110600322
NCBI-ProteinID:
XP_021592845
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All DBs
Position
14:3969612..3976724
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AA seq
924 aa
AA seq
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MARLLVHSTNIPAIASGVKHGQSQESETSRRATTKMMCSSRSPTLVLRGFSGLRSSNSLD
MLLRSGQDFHSKVGITMSRRQQKAKRFSPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADTSNIRTQVIRMVGESTENI
PAPVGPGGGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLI
GEPGVGKTAIAEGLAQRIASGDVPETIERKKVITLDMGLLVAGTKYRGEFEERLKKLMEE
IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
PALERRFQPVKVPEPSVDETIEILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFL
PDKAIDLIDEAGSRVRLRHAQVPEEARELEKEVRQITKEKDEAVRSQDFEKAGELRDREM
DLRAQIAAIVEKGKEMSKAETEAGDVGPIVTESDIQHIVSSWTGIPVEKVSTDESDRLLK
MEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVILFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKGKD
IELQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGDIKEGDSVIVDVDS
DGNVIVLNGSSGSPESLPDVLSIV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcttctggttcattctactaatattcctgccatagcttctggtgtaaagcat
ggccaatctcaagaatctgaaacatcaagaagggcaaccactaaaatgatgtgtagttca
cgatcaccaacattggtattgagaggattctcaggtctgcgaagttcaaactctttagat
atgttgctaagatccggacaagatttccattccaaggttggaatcacaatgtcccgcagg
caacagaaggcaaagcggttttcacctagggcaatgtttgaacgcttcacggaaaaagca
attaaagtaatcatgcttgcccaggaggaagcaagacggcttggtcacaactttgttggc
acggagcaaattttgctgggtcttattggtgaaggaactggtattgcggcaaaggtgctc
aaatctatgggaatcaatctcaaggatgcacgtgtagaagtggagaagataatagggagg
ggcagtggatttgttgctgtggaaattccatttactcctcgtgcaaagcgtgtgctggaa
ctctcacttgaggaagcccgccagcttggtcacaactatattggatctgagcacttgctt
ctcgggctgctacgtgaaggtgaaggtgtagcagctcgtgttcttgagaatttaggtgct
gacactagcaacatccgcacacaggtcattcgcatggtgggtgaaagcacagaaaatatt
cctgctcctgttggaccaggaggtggcagcaataagatgcctacacttgaagagtatggg
actaatttgaccaagctagcagaggagggtaaactggatccagttgttggaagacagcca
caaatagaacgtgtcgtccaaatcttgggtcggcgaactaaaaacaacccctgtcttatt
ggagaaccgggtgttggaaaaacagcaattgcagaaggtctcgctcaacgtatagcaagt
ggtgatgttcctgaaacaatcgagagaaagaaggtcattaccctggatatgggtcttctt
gttgctggaactaagtaccgaggagagtttgaggaaagattgaagaagctaatggaagaa
atcaaacaaagtgatgaaataattctttttattgatgaagtgcatacattaattggagct
ggagcagcagaaggtgcaattgatgcagctaatatcttgaaaccagcgcttgcgagaggt
gaattgcagtgtattggagctaccacattggatgaatacagaaagcacattgagaaggac
cctgctttggaaagacgattccagccggtcaaagtgcctgagccatctgttgatgaaaca
attgagattctgaaagggctgcgagagcgatatgagatccaccacaagctccgttacaca
gatgaagcactagtatccgctgcacagttgtcatatcaatacatcagtgatcgttttctg
cctgataaggcaattgacttgattgatgaagctggttctcgggttcgccttcgtcatgca
caggttcctgaggaagctagggagcttgagaaagaggtcaggcaaataacaaaggagaag
gatgaagctgtccgtagccaagactttgaaaaggctggtgaattacgggatcgtgaaatg
gacctaagggcacaaattgcagctatcgtggagaaaggcaaggagatgagtaaggctgag
actgaggcaggggatgtaggtcctattgtcactgaatcagacattcagcacattgtttct
tcttggaccggcattcctgttgagaaagtttcaaccgatgaatctgatcgcctcttgaag
atggaagagaccttgcacaagagagtcatcggtcaggatgaagctgtcaaagccattagc
cgtgctattcgccgagcccgtgttggactcaagaaccccaatcgtccaattgctagcttc
atattttctggtccaactggcgtagggaagtcagaactggcaaaagcactagctgcttac
tactttggctctgaggaagccatgatccgccttgatatgagtgagttcatggaaaggcac
accgtctccaagctcataggttcaccccctggttatgttggttacaccgagggagggcag
ttgacagaggctgttcggcgtcggccttacactgtaatactctttgatgagattgagaag
gcccatcctgatgtcttcaacatgatgcttcagattcttgaagatggaaggttgacagac
agcaagggtagaacagtggacttcaagaatacccttttgataatgacatcaaatgttgga
agcagtgttatcgagaagggaggaagaaggataggatttgaccttgattatgatgagaag
gatagcagttacaatcgaataaagagtctggtgacagaggaattgaagcagtatttcagg
ccagaattcttaaataggttggatgagatgatcgtgtttcggcaactcactaagcttgag
gtcaaggagatagctgatataatgttgaaggaggtatttgacaggctgaagggcaaagac
atagaacttcaagtgacagagagatttagggagagggtggttgaagaaggatataaccca
agctatggggcaaggccattaagaagagccataatgagactgctggaggacagcatggct
gagaaaatgcttgcaggagatatcaaagagggtgactcggttatcgtagatgttgattct
gatgggaatgttattgtgctcaatggcagcagcggatctcccgagtcattgccagatgtg
ttgtctatcgtgtaa
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