Manihot esculenta (cassava): 110600417
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Entry
110600417 CDS
T05761
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25 isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110600417
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110600417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
110600417
NCBI-ProteinID:
XP_021592967
LinkDB
All DBs
Position
14:8183928..8206771
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AA seq
836 aa
AA seq
DB search
MAEKQLIVAVEGSAAMGPFWQTILSEYLEKMIRSFCGSDLTGQKPSPSNAELSLVTFYSH
GSYCACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPCTQNGSQAQ
QNIEGQRHCVLIAASNPHPLPTPVYRPQIQNLEQSENIDPQTESRLSDAETVAKSFPQCS
VSLSVICPKQLPKIRAIYTAGKRNIRAADPAVDNVKNPHFLVLISENFMEARASLSRPGV
ANLPSNQSPVKLDVASVASAAGPAPSSIPSVNGSIMNRPPMSVGTVPTATVKVEPTTVTS
MAPGPAFPHITSVRPASQPVPSLQTSSPPTTTQEMIASGENVPDLKPSVSGMQQSVRPVP
PGTANVSILNNLSQARQVMNSAALTGGTTIGLQSVTQTPVAMHMSNMISSGMASSVPAAQ
NVFSSGQPGITSIAGSGTTQVAANSGLGSFTSATSNISGNSNLGISQPISNLQGGVSMGP
SVPGMSQGSLSGAQMVQSGIGMNQNMMSGLGPSGVSSGSSTMIPTPGIPQQAQSGMQSLG
VNNNSAANMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETL
AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQT
LLLSVSDKACRLIGMLFPGDMVVFKPQISSQQQQMQQQHHQQMQPQQHPQLQQQQLPQLQ
QQQLPQLQQQQQLPQLQQQQQLPQMQHQQQHPQLQQQQQLSQLQQQQQLQQQQPQQLPQL
QQQQQQLQQQLPQQQQMVGTGMGQAYVQGPGRSQLVSQGPVSSQGPTNMPGGGFMS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcagcttatagtggccgttgaaggctccgcggccatgggccccttctgg
cagaccatcctttcggagtaccttgaaaagatgatcaggtctttttgtggtagtgacttg
actgggcagaaaccttcaccttctaatgccgagctctcactggtaacgttttattcccat
ggatcttattgtgcttgcttagtgcaacgaagtggctggacaagagatgttgacatattt
ttacaatggttatcggctattccttttgctggtggtggcttcaacgatgctgcaattgca
gaaggtctttctgaagctttaatgatgtttccttgtactcaaaatggaagccaagctcaa
caaaatatagaaggacaaaggcattgtgttcttattgcggcaagtaacccccatcccttg
ccgacaccagtctatcgaccacaaatacaaaatttggagcagagtgaaaatattgatcca
caaactgaaagtcgtctatctgatgcagagactgttgcaaaatcttttccccagtgctca
gtatctctgtctgttatttgtccaaaacaactgccaaaaattagagctatctacactgcg
ggaaagcgcaacatccgagcagcggatccagcagttgacaatgttaaaaatcctcatttt
ctcgttctaatatctgagaatttcatggaggctcgtgcttctttaagtcgtcctggagtt
gcaaatctaccttctaatcagagtcctgtaaaattggatgttgcttcagttgcttctgct
gcaggtccagcgccatcttcaataccatcagtgaatggatctatcatgaaccggccacca
atgtctgttggaactgttcccactgcaactgttaaagttgaaccaaccactgtaacttcc
atggcacctggacctgcttttccacatattacatctgtgcgtcctgcttctcaaccagtt
cctagtttgcagacatcttcacctcctacaactactcaagagatgattgcaagcggtgaa
aatgtgccagacttaaaaccgagtgtcagtgggatgcaacaatctgtacgtcctgtgcct
cctggtacagcaaatgttagtatactgaataatctttctcaagcacgccaagtgatgaac
tctgctgcactaactgggggaactacgattggtcttcaatcagtgactcaaactcctgta
gccatgcatatgtcaaatatgatatccagtggaatggcttcatctgtgcctgctgctcaa
aatgtattttcatctggacaacctggtattacttcaatagcgggatcaggaactacacaa
gttgcagcaaactctggtcttggttcttttacttctgcgacttctaacatatccggaaac
tcaaatcttggaatttcacaaccaatcagtaaccttcaaggaggtgttagcatgggtcca
tcagtaccgggcatgagccaaggaagtctttcaggagctcaaatggtgcaaagtggaatt
ggcatgaatcaaaatatgatgagcggtcttggtccatcaggtgtttcttctgggagcagc
accatgatcccaactccaggaatccctcaacaagcacaaagtgggatgcagtctcttggt
gtgaataacaactcagcagctaacatgccattgtcacagcagacaacaagtgctttgcaa
tcagcacaatcgaagtatgtcaaagtctgggagggaaatttgtctgggcagcgacaagga
cagcctgtctttatcacgagattggaaggttacaggagtgcttctgcttctgagacgctt
gcagcaaactggccaccaacaatgcaaatagttcggcttatatctcaggaccacatgaat
aacaagcagtatgttgggaaggctgattttctagtattccgggcaatgaatcagcatgga
tttcttggacaactgcaagaaaagaagctttgtgcagtcatccaattgccatcacagacg
ttactgctttctgtttcggacaaagcctgccgcttgatagggatgctctttcctggggat
atggttgtttttaagcctcaaatatccagtcagcagcaacaaatgcaacagcagcatcac
cagcagatgcaaccacagcagcatccacagttacaacagcaacaacttccacagcttcaa
cagcaacaacttccacagctgcaacagcagcaacaactcccacagctgcaacagcagcag
caactcccacagatgcaacatcagcaacagcatccccagttgcagcaacaacaacaactc
tcacagcttcagcaacaacaacagcttcaacagcaacagccacagcagcttccccagttg
cagcagcagcaacagcagttgcagcagcaacttccacagcagcaacaaatggttgggaca
ggaatgggtcaagcatatgttcagggtccgggccggtcacaattagtctctcagggacca
gtttcatcacaagggccgacaaacatgcctggaggtggctttatgagttga
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