KEGG   Manihot esculenta (cassava): 110600470
Entry
110600470         CDS       T05761                                 
Name
(RefSeq) RING-H2 finger protein ATL79
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110600470
Enzymes [BR:mesc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110600470
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110600470
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_3 FANCL_C zf-RING_16 zf-RING_4 SLX1_C Prok-RING_4 Prok-RING_1 RINGv PHD zf-RING_Vps41
Other DBs
NCBI-GeneID: 110600470
NCBI-ProteinID: XP_021593031
LinkDB
Position
14:7887581..7888006
AA seq 141 aa
MLKYLSLISAHFKWALNFLIRNPLFQYHDHLYKPEDQFVDDEEVSTGQYYKCEASCSEAI
ECAVCLSKIEQGEEMRELRRCKHMFHRVCLDRWVAYGRMTCPLCRDSLAPRRLISELGGQ
VLVFKFSSFIGSDDRHTWWLR
NT seq 426 nt   +upstreamnt  +downstreamnt
atgctcaaatacttgagtttgatctctgcccacttcaaatgggcattgaatttcttgatt
cggaatcctctcttccaataccatgatcacctttacaagccagaagatcagtttgttgat
gatgaagaagtaagcacagggcagtactacaagtgcgaagcaagctgcagtgaagccata
gaatgtgcagtttgtctgagtaagattgaacaaggagaagagatgagagagttgagaaga
tgtaagcatatgtttcatagagtttgcttagacagatgggttgcttacggccgcatgact
tgccctctttgcagggactcgcttgctcctcgaagactaatctccgagcttggagggcaa
gtgttagtgttcaagttttcttctttcattggctcagatgatcgtcacacttggtggctg
cgatag

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