Manihot esculenta (cassava): 110600611
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Entry
110600611 CDS
T05761
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110600611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110600611
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110600611
Prokaryotic type
Archaeal type
TFB
110600611
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
DUF7573
RB_B
Motif
Other DBs
NCBI-GeneID:
110600611
NCBI-ProteinID:
XP_021593172
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All DBs
Position
14:1562213..1564537
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AA seq
345 aa
AA seq
DB search
MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESTDNDPVRVG
GPSNPLLADGGLSTVISKPTGTSGDFLTTSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLVSSILAFWNLSCSIIFSYLDSNKHRLV
QFWHFQRRFCSHLGMNNQAVKAAQEAVQKSEELDIRRSPISIAAAIIYMITQLSEDKKLL
KDISLATGVAEGTIRNSYKDLYPYASRIIPSWYAKEDDLRSLCSP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacctactgccccgattgtaagcgtcccacggaggtcgtcttcgaccactcc
gccggcgacaccgtctgctctgagtgcggcctcgtcttggaggctcattccatcgacgag
acctctgagtggcgaacctttgcaaacgagtctactgataatgaccctgttcgtgttggt
ggtccctctaatcctcttctcgctgacggtggcctttcaaccgtcatttctaaacccact
ggaacttctggggatttcttgaccacttctttgggtcgctggcagaaccgtggctccaac
cctgatcgttctctaatccaagcgtttaagactattgccaccatgtctgacaggttgggc
ctggttgcaaccattaaggatagagctaatgaaatttataagaaagtagaagatcaaaaa
cctctcagaggacgaaatcaggatgcaattttggctgcttgcctttacatagcttgtaga
caagaagacaaaccccgcactgtaaaagaaatatgttcagttgctaatggagccacaaag
aaagagattggccgtgcaaaggagtatattgtgaagcaactggaggtagagctgggtcag
tctatggaaatggggacaatacatgctggggacttcctggttagttcaattctggcattt
tggaatctctcctgttctattatttttagttatcttgacagcaataaacatcggttagtt
caattctggcatttccagagacgtttttgttctcatcttgggatgaataatcaagcagtt
aaagcagctcaggaagctgtacagaaatctgaagagctcgatataaggcgaagccccata
tcaatagcagcagcaatcatttacatgataactcagctgtctgaggataagaaacttctc
aaagatatatcactggctacaggagtagcagaagggaccattaggaattcttataaagac
ctgtatccctatgcttcaaggattataccaagctggtatgcaaaggaggatgatctcagg
agcctatgcagcccttga
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