Manihot esculenta (cassava): 110600768
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Entry
110600768 CDS
T05761
Name
(RefSeq) tryptophan synthase beta chain 1 isoform X1
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00260
Glycine, serine and threonine metabolism
mesc00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
mesc01230
Biosynthesis of amino acids
Module
mesc_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110600768
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
110600768
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
110600768
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
110600768
NCBI-ProteinID:
XP_021593325
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Position
15:5641509..5645674
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AA seq
468 aa
AA seq
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MAATYCRAHSSSSSTISNPYSSSKLPFKFRNFKPSSSSSYHSIRFSVSCTLARDAAVKRE
GKEDSDPALWQRPDSYGRFGKFGGKYVPETLIHALSELESAFNSLKDDPDFQNELAGILK
EYVGRETPLYFAERLTEHYRRPNGEGPHIYLKREDLNHTGAHKINNAIGQVLLAKHLGKK
RIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTA
TLKDATSEAIRDWVTNVETTHYILGSVAGPHPFPMMVREFHKIIGKETRKQAIEKWGGKP
DVLVACIGGGSNAMGLFDDFVKDKDVRLIGVEAAGLGLDSGKHAATLTKGQVGVLHGAMS
YLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKEKGRAEYYSVTDEEALEAFKRLSRLEG
IIPALETSHALAYLEKLSPTLPNGTKVVLNCSGRGDKDVQAAIKYLQV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgctacttactgcagagctcacagttcttcttcttctaccatctccaacccctac
tcttcctccaagttgccctttaagttcagaaattttaagccttcctcatcctcttcttat
cactctattagattttccgtctcttgcactttggccagagatgctgctgtcaagagggaa
ggaaaagaggattctgacccagctctgtggcagcggcccgattcttatggcaggtttggt
aaatttggcgggaagtatgtccctgaaaccctaatccatgctctctctgagctcgaatcc
gccttcaattctctcaaagatgatcctgattttcagaatgaactagctgggattttgaaa
gaatatgttggtagggaaactcctctctattttgccgagcgtcttacagagcattatagg
cgtcctaatggtgaaggaccacacatttacctcaagagagaagatcttaatcacacaggt
gctcataagatcaataatgccattgggcaagttttgcttgctaaacatttgggcaaaaaa
cgtataattgctgaaactggagctggacagcatggagttgcaactgctacagtttgtgca
aggttcggcttgcagtgtatcatctacatgggtgcacaagatatggaaagacaggcactt
aatgttttcaggatgcggcttcttggggctgaagtcagggcagtccattctgggactgca
acactgaaggatgctacatcagaagctatacgagattgggtgactaatgtggagacaacc
cattatattttgggatctgtagctggaccacatccatttcccatgatggttcgggagttc
cataagattattggtaaagagacaagaaaacaagcaattgaaaaatggggtgggaagcct
gatgttctggttgcatgtattggtgggggctccaatgcaatgggactgtttgatgatttt
gttaaagacaaggacgttaggttgataggtgtggaggctgctggtttaggcttggatagt
ggtaagcatgcagcaactttgaccaaaggacaagttggtgtcttacatggagctatgagc
tacttattacaagatgatgatggacaaataattgagcctcattctataagtgcagggttg
gattacccaggagttggacctgagcacagttttctgaaagaaaaaggacgtgctgaatac
tatagtgttacagatgaggaggcattggaagcattcaagaggttatcacgattagagggc
ataatacctgctctggagacatctcacgccctggcatatttggagaagctcagcccaact
ctcccaaatggaactaaggttgtgttgaactgcagtggcagaggtgataaggatgtgcag
gccgccataaaatatttgcaagtttag
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