Manihot esculenta (cassava): 110600836
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Entry
110600836 CDS
T05761
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110600836
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110600836
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Ortholog
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110600836
NCBI-ProteinID:
XP_043807516
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Position
15:11451975..11457301
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AA seq
581 aa
AA seq
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MAASSSSVPFFGIRDEDHQNQMTQQHSSTPTSSSAPAPPPQKKKRNLPRTPNPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCV
HHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARNPPSTLSTIASHLYGGSNMSLGVSQVGTQISSMQEQ
SSDILRLGGGGRSGQFDHLLPPSMGSTSFRQPSQQMPSSAFFMQEPNQNYHEEHQSQQGL
LQNKSFHHGLMQFADIHSTTSNNPPPPASNLFNLSFISSSSSTSNIANSNLPPSGLLLST
HFNGHNGASGDGEGSNIFTNNIISDYHHHHHQMTSGVPSLFSSSVQNDKMFPHMSATALL
QKAAQMGSTTSTNSASLLRSFGSSSSSGIKSNRQLGAANFGGVFNENDNNLHDLMNSFAT
GNSSLFASGHGQENSYSGNPEEPKLHQGLNMSIGGSDRLTRDFLGVGQIVRSMSGGFSQR
EKHQQLQQPPQPGIEMSSSLDSERNITAQTSQSFGGIGDFQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttcatcggtgcccttctttggaattagggatgaagatcatcaaaac
cagatgacacaacagcattcctcaacaccaacttcatcttctgctccagctccaccacct
cagaagaaaaagagaaacctacctcgaacaccaaatccagacgcagaggtgatagcacta
tctcccaagaccctaatggcaacaaatcggttcatatgtgaggtatgcaacaaagggttc
caaagggagcaaaacctacagctgcacagaagaggacacaacctgccttggaagcttaag
cagaagactacaaaagaagtgaagaggaaggtctacttgtgccctgagcccacatgcgtc
caccatgatccttctagggctcttggtgaccttactggtatcaaaaagcactactctaga
aaacatggtgagaagaaatggaagtgtgagaagtgttctaagagatacgctgttcaatct
gattggaaagcccattctaaaacctgcggcactagagaatacagatgtgactgcggcact
ctcttctcaaggcgtgacagttttatcactcatagggccttctgtgatgcgttggctcag
gagagtgctcgaaatcctccttccaccttgagcaccattgcaagtcatttatatggaggt
agcaacatgagcttaggcgtatctcaagtgggtactcaaatttcatcaatgcaagaacaa
tctagtgacattttacgacttggtggaggtggccggagtggacaatttgaccatctcctt
cccccatctatgggttcaacatcgtttcgacaaccatcgcagcaaatgccttcatctgct
ttctttatgcaagaaccaaaccagaattatcatgaggaacaccaatctcaacaagggctg
ctgcaaaataaatcatttcatcatggattgatgcaattcgctgatattcatagcaccaca
agcaacaaccctcctccccctgcctccaatcttttcaaccttagctttatttccagtagc
agcagtacaagcaacatcgctaacagcaatttaccaccttcgggactgctactgtccact
catttcaacggccataatggtgccagcggagacggtgaaggatccaatatcttcacaaac
aacataataagtgattatcatcatcatcatcatcaaatgacgtctggtgtcccttctctc
tttagctcctcagttcaaaatgataagatgtttcctcatatgtctgctacggcattgctt
caaaaggcagctcaaatgggttcaactacaagcacaaacagtgcatcattgctgagaagc
tttggtagctcttcctcaagcggaattaaatcaaataggcaattaggtgcagctaacttc
ggaggcgttttcaacgaaaatgacaacaatctccatgacctaatgaactcatttgcaact
gggaattcatcccttttcgcttctgggcatggacaagaaaactcttacagtggaaacccg
gaggaaccgaagttgcaccagggtctgaacatgagcattggagggtctgatagattgacc
agggactttctcggggtcggacaaattgttagaagcatgagtggagggttttcgcaaaga
gaaaaacatcaacagctgcagcagccaccacagcctggcatagaaatgagctcctccttg
gattcagagagaaatattactgcgcagacaagccaatcttttggaggaattggggacttt
caatga
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