KEGG   Manihot esculenta (cassava): 110600928
Entry
110600928         CDS       T05761                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X2
  KO
K10846  DNA excision repair protein ERCC-5
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110600928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110600928
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110600928
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 110600928
NCBI-ProteinID: XP_021593555
LinkDB
Position
15:23884275..23895570
AA seq 1688 aa
MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWIVQFMKAMRDEKGEMVRSAHLLGFFR
RICKLLYLRTKPVFVFDGATPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKTMRLK
ELAKDLENQRKKQKNDSKGKKLLSDQKQEEESNLQNTDVESYDQEKLDEMLAASIVAEED
GHLNNNASTSDAAAPAMEAEDSDENEEIILPAMDGNVDSAVLSALPPSMQLSLLMRQSSM
VENRKDNKDVKDIVDQKDQKRNLIDLTDTEGSNLEGSSVVAENYNQEKLDEMLAASIAIE
EDESLTKSASLSAAAIPFEEGSGDEEEEMILPAMCGKVDPAVLAALPPSMQLDLLVQMRE
RLMAENRQRYQKVKKAPEKFSELQIEAYLKTVAFRREIDQVQKAAAGQDVGGVQTSRIAS
EANREFIFSSSFTGDKQLFTSAGMQRNGNKKQQTPTGQCPSDSVDHVASNTAIGMLQDES
TRVFDEDIGTYLDERGNVRVSRVRAMGMCMTRDLQRNLDLMKEIEQERIHAMKSAASHSE
LDKQNVGSSKRIPSKKRHVKVSLNNCGDTVNLIDRDGLSILDNEKSIHISFDVDFNDESK
CVDSDDNIFTSLVAGQPIKIASAGSGPSRSQSAYSASDSDRGEGVIEGRGNSSNGITLET
NPPPKESNTSDDSEVDWEEGVCNVHDSSLPSESGKPASKGYLEEEADLQEAIRRSLEDLG
CEKLNQEPTLLENLVCSKENAYKGIVFLDQEDNTGGRNLVDENAAQQHKPFPEIVAVRKL
DSMGQIHVSQVCSSSDRQLKDETCVPNNMSFLPNKSCTRNLGSDAGQSNEATSVGGCLFG
EMPSVEPAAPLEVRDVHVMVNQFSHTFVQEIGLSTSEMHSGDASRVSGALFGGVSSPIPI
DDELNKMKAEPSMLVNEEKKTEPSYQPIEISNPSMYVTELSKASTTGTDVEPNLDGKRNS
DHEVDEKEHYMNKFGRNENLQAGISEASLQEEILNLGKEFTNLGDEQKKQERNAESVSSE
MFGECQELLQMFGLPYIIAPMEAEAQCAYMEQANLVDGVVTDDSDVFLFGARNVYKNIFD
DRKYVETYFMKDIEKELGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL
KKFREWIESPDPSILGKLGAQNDSSVRKRGSKVGGNDSNCANSNIEGINSFNQNINQCHE
GEQSADHIQEIKQIFMDKHRNVSKNWHIPSSFPSEVVISAYSCPQVDKSTELFTWGKPDH
QVLGRLCWEKFGWGIQKSDELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAV
KGITGNQSSELMDDAGNYKSKKNRMIRPGESGDAKPERPSKRAKGGSNKMKSLEKSAGAP
VSSEVENPGHQWQEESGQSTHKGSRGDGKKRGRGCGRGKGRGRGTLGFEQSDSSPGDVSD
GDDELEVHVEKSERVQEVRRSLRSRKPVNYTLDDLEIDDVDQSLGEGDTRPNEGALEAGV
SGVQGASENAEQMTSQSLDPLPDDFFDDHLEQEVGFLADEAGSGHAGVTKNTYPSEAGVS
DDYLMRGGGFCVDESETATHQDTCHSPSMAAECGTVDSSHFTGLMEETDRGKVSVQSVSR
VQRSSNDIQDGGKTNAFDSESSVGCVNATDTSGHFEVSLPESSKKDAGESSVRSLSAMPF
LRRKRKKN
NT seq 5067 nt   +upstreamnt  +downstreamnt
atgggagtccatggtttgtgggaccttctcgctcccgtcggccgccgcgtatccgtcgaa
acactctccggaaaaaagctcgcaatcgatgcgagtatatggattgtccagttcatgaaa
gcgatgagggacgagaagggtgagatggtacggagcgcacatttgctagggttctttcga
cgaatttgcaagctcttgtatttgaggactaagcctgtgttcgtcttcgacggtgccaca
cctgctctaaagcggcgcaccgtgattgccagacggaggcagcgtgagaatgcccaggct
aagattcgcaaaaccgccgagaaattgctccttaatcatctcaagacgatgaggctaaaa
gaattggcaaaggatcttgagaatcagagaaaaaagcagaagaatgattctaaaggtaag
aagttgttgtctgatcaaaaacaagaggaggagagcaatctacagaatactgatgtagag
agttatgatcaagaaaagttggatgaaatgttggctgcatctattgtggctgaggaagat
gggcatctaaataacaatgcatcaacttctgatgctgcagctcctgccatggaggcagag
gatagtgatgaaaatgaagagatcatattgccagcaatggatgggaatgttgattcagct
gtcttgtctgctttgcctccttcaatgcaacttagccttttgatgagacaaagttcaatg
gtggaaaacagaaaagataataaagatgtcaaggatattgtagaccagaaagatcagaag
agaaatttgatagatctaacagatacagaagggagtaatttagaggggagtagtgtggta
gcagagaattacaaccaggaaaagttagatgaaatgttggcagcatctattgcgattgag
gaagatgagagtttaaccaagagtgcctcactgtctgctgctgcaattccttttgaggag
ggaagtggagatgaggaggaagaaatgatactgccggcaatgtgtggaaaagttgatcct
gctgtattagcagctttgccaccatcaatgcagctcgatcttcttgttcagatgagggag
aggttgatggctgaaaatagacaaagataccaaaaagtcaagaaggcacctgaaaaattt
tctgagctgcaaattgaggcctaccttaaaactgttgctttccgccgggaaatagatcaa
gtgcagaaagctgctgctgggcaagatgtaggtggagttcagacttcacggatagcttct
gaagccaacagagaatttatcttctcatcatcctttacaggggacaagcaattgtttaca
tctgctggaatgcagagaaatggaaataagaaacaacagacaccaacagggcaatgtcct
tcagattctgtggatcatgttgcttccaatactgctataggaatgctgcaggatgaatct
acaagggtatttgatgaagatattgggacatatctagatgaaaggggtaatgttcgagtt
agtagagtgagggctatggggatgtgcatgacccgtgatttgcaaaggaacttggattta
atgaaagaaattgaacaagagagaatacatgcaatgaagagtgcagcttctcactctgag
ctcgataaacagaatgttggttcttcaaaaagaatccccagtaagaaacggcacgtaaaa
gtttcactcaacaactgtggtgacactgttaatttaattgatagagatgggctgtccatc
ttagataatgagaaatctatacatatatcttttgatgttgattttaatgatgaaagtaag
tgtgtggacagtgatgacaacatatttacttctttagtagcaggacaacctattaagatt
gcttctgctggcagtggtccatccagaagtcagtctgcttattctgcttcagatagtgat
cggggggaaggagttattgaaggaagaggtaatagttctaatggtattacattagaaact
aatcctcctcctaaggaaagcaacactagtgatgatagtgaagtggattgggaagaggga
gtttgcaatgttcatgattcctcactcccatctgaatcaggaaaaccagcttccaaaggt
tatttggaggaggaggcagatttgcaagaagcaataaggagaagtcttgaggatttgggg
tgtgaaaaattaaatcaagaaccaactttgcttgaaaatttagtatgctcgaaagaaaat
gcttacaaaggtatcgtattccttgatcaagaagataatactggtgggcgaaatcttgtt
gacgagaatgctgcccaacaacataaaccttttcctgaaattgtggcagttaggaagctt
gacagcatgggtcaaattcatgtctctcaggtctgttcttcttcagacaggcagttgaag
gatgaaacttgtgttcctaataacatgtccttcctaccaaataaatcatgtacaagaaat
ctgggttcagatgctggacaatcaaatgaagctacaagtgtagggggctgtctgtttgga
gaaatgccatctgtagaaccagctgcacctttggaagtaagggatgtccatgtgatggtg
aatcaattttcacatacttttgttcaggagattggattatctacaagtgaaatgcattca
ggtgatgcttctcgtgtttctggagcattatttggtggcgtatcttctcctataccaatt
gatgatgaactaaacaaaatgaaagcagaaccatccatgttggtcaatgaggagaaaaaa
actgaaccatcttatcaacctattgaaatatccaacccatccatgtatgttactgagtta
tcgaaagcttcaacaactggcactgatgttgaaccaaatttggatggaaaaagaaattct
gatcatgaagtagatgaaaaagagcactacatgaataaatttggaagaaatgagaatcta
caggctggcatctcggaggccagtttgcaggaagaaatattgaatcttggtaaagaattt
acaaatctaggagatgaacagaaaaagcaggaacgcaatgcagaatcagttagcagtgag
atgtttggagaatgtcaggagctgctgcagatgtttggcttaccatatattatagcacct
atggaagcagaagctcaatgtgcttacatggaacaagcaaatcttgtcgatggtgttgtt
actgacgattccgacgtgttcttgtttggggcacgaaatgtgtacaagaatatatttgac
gaccgcaaatatgttgaaacatacttcatgaaggatattgaaaaggagctaggcctaacc
agagaaaaactaattcgcatggctctacttcttggaagtgattatactgagggtattagt
gggattggcattgttaatgctattgaagttgtgaatgcatttcctgaagaggatggcctt
aagaaattccgagagtggatcgagtccccagatccaagcattctggggaagttaggtgca
caaaatgattcaagtgtgagaaaacgagggtcaaaagttggtggcaatgattcgaattgt
gcaaatagcaatattgaagggattaattcatttaaccagaacattaatcaatgtcatgag
ggtgaacaatctgcagatcacattcaagagataaagcagattttcatggataagcataga
aatgtgagcaagaactggcatattccttcatcttttccaagtgaagtagtcatttctgca
tattcttgtccacaagtggacaaatcaactgagcttttcacttggggaaagccagatcat
caagttcttggcagattatgctgggaaaaatttggttggggtattcagaagtcagatgag
ttgctattgcctgttctgaaagagtacaataaacatgagactcaactacggttggaagcc
ttttacactttcaatgaaagatttgcaaaaatacgcagtaagagaatcaagaaagctgtc
aaagggatcacaggaaatcagtcctcagaattgatggatgatgctgggaattataaaagc
aaaaagaatagaatgataaggcctggtgaatctggtgatgcgaaaccagagagaccttcc
aagagagcaaagggaggcagcaataagatgaaatctttggaaaaatctgctggagcacct
gtttcatctgaagtggagaacccaggacatcagtggcaggaagaaagcgggcaaagcacc
cataaaggatcacgtggggatggaaaaaaaagagggagaggctgtggaagaggaaaaggc
aggggaagaggaactcttggatttgaacagtctgactccagccctggtgatgtcagtgat
ggtgatgatgagttggaagttcatgtagagaagtcagagagagtgcaagaagtacgaagg
tccttgcgctcaaggaagccagtaaattacactctggatgacttggaaatcgatgacgtg
gaccagtcattaggcgagggtgatacaaggcctaatgagggagcactagaagcaggtgta
tctggagttcaaggggcaagtgaaaatgctgaacaaatgacttctcagagtctagatcct
ttgcccgatgacttctttgatgaccatcttgaacaggaagtgggatttttagctgatgaa
gctggaagtggtcacgctggtgtgacaaaaaatacttatccctctgaagctggtgtctct
gacgattaccttatgaggggaggtgggttttgtgtggatgaaagtgagacagctacccac
caagacacgtgtcatagcccctccatggctgctgaatgtggaactgttgattcatctcac
ttcactggtcttatggaagaaactgaccgtggcaaggtttcagttcaatcagtttctagg
gtccaaagaagttcaaatgatatccaagatgggggaaagacaaatgcttttgattctgag
tcgagtgtgggttgtgtaaatgcaacagacactagcggtcatttcgaagtcagtttgcca
gaaagctcaaaaaaagatgctggggaatcgagtgtaagaagtctcagtgcaatgccattc
ttgagaagaaaacggaagaagaattga

DBGET integrated database retrieval system