Manihot esculenta (cassava): 110600972
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Entry
110600972 CDS
T05761
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110600972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110600972
03032 DNA replication proteins [BR:
mesc03032
]
110600972
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
Sm proteins
110600972
U2 snRNP components
110600972
Complex B
U1 snRNP components
110600972
U4/U6.U5 tri-snRNP components
110600972
Complex C
U2 snRNP components
110600972
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110600972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
110600972
NCBI-ProteinID:
XP_021593623
LinkDB
All DBs
Position
15:complement(11063000..11066101)
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AA seq
107 aa
AA seq
DB search
MSRPMEEEGSKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKAMPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagccggccaatggaggaagagggtagcaagaatgaggaggaggagtttaacactgga
cccctttcagtactcatgatgagtgtcaaaaataacacacaggtgcttattaattgtcgg
aacaacaaaaaacttcttggtcgtgttagagcatttgatcggcattgtaacatggttctt
gaaaatgtcagggagatgtggactgaggtacctaagacaggaaagggcaagaaaaaagcc
atgccagtaaacaaagacagattcattagtaagatgtttctgcggggagactccgtaatc
atcgttcttaggaatcccaagtga
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