Manihot esculenta (cassava): 110601172
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Entry
110601172 CDS
T05761
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110601172
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110601172
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110601172
NCBI-ProteinID:
XP_021593906
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Position
15:18504027..18506152
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AA seq
490 aa
AA seq
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MEVANKLVLIFVVSFVIIIPYLEAADMVQYDDVWKRRAQEAKKNMMITYIPNPLEVTQEF
DSQFNQDKEKNGTWDSDEKWEIGIGDSSNNGTWDSDDKWKNETWDSSKNGTRDSGTEKEM
NESRRNLRQGKTLYKGPCHATNPIDRCWRCKDNWSNQRKRLAECGLGFGRRAVGGKAGKI
YEVTNNRDDNVAEPIPGTLRHAVIQKEPLWIIFARDMNIKLSKELIVNDNKTIDGRGANV
HIAYGAGITIQFVSNVIIHGIRIHHIGPASGGMIRDAPDHCGLRTQSDGDGISIFGSSNI
WIDHVSMSRCHDGLIDAIQGSTGITISNSHFTHHNDVILLGASDSFSGDQFMQVTVAFNH
FGQGLVQRMPRCRWGFFHVVNNDYTHWQLYAIGGSMHPTIISQGNKFIAPNNIYLKQVTK
RDYATEAEWKKWIWRSEGDLFMNGAYFVESGQKLSTTPSKKYLIKAKPGVYASKITRFAG
ALDCKRGKKC
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggctaataagttagtattgatctttgtggtttcttttgtcatcattattcca
tacctagaagcagcagacatggtccagtacgatgatgtctggaaacgacgagcccaggaa
gctaagaaaaatatgatgatcacctatattccaaaccctttagaagtcacgcaagaattc
gattctcaatttaaccaggacaaggagaaaaatggaacttgggattctgatgaaaagtgg
gaaattggaattggggactcctcgaacaatggaacttgggattctgatgacaagtggaaa
aatgaaacctgggactcctcgaaaaatggaactcgggactctggtacggagaaagagatg
aacgagtccaggaggaacctgagacaaggaaagaccctgtataaaggtccatgccacgca
accaacccgattgatcgttgctggaggtgcaaagacaactggtccaatcaacgtaaacgt
cttgcagaatgtggacttggtttcggacgtagagccgtcggaggaaaggctggaaaaatc
tacgaggtcacaaataatcgtgacgacaatgtggcggagcctataccaggaactttgcgc
catgcagtgatccaaaaggaaccattgtggatcatatttgcgagagatatgaacattaag
ttgtcgaaagagcttatcgtgaatgacaataagaccattgatggaagaggagctaatgtg
catattgcttatggtgctgggattaccatacaatttgttagtaatgtgatcattcatgga
atccgtatccatcacattggtcctgctagtggtggtatgattagggacgcacccgatcat
tgtggactcaggactcagagcgatggagatggcatttccatctttggatcctcaaacatt
tggattgatcatgtttctatgtcaagatgccacgatggtctcattgatgcaattcaggga
tccactggaatcaccatttcaaattcccatttcactcaccacaacgacgtgatcttgttg
ggtgcaagcgacagcttctcaggcgatcagtttatgcaagtaacagtcgcattcaaccat
tttggacagggattagtacagagaatgccaagatgcagatggggtttcttccatgtggtt
aacaatgactacacccactggcagctgtatgccattggaggaagcatgcatcctaccatt
attagccagggaaataagtttattgcaccaaataacatttatcttaaacaggtgaccaag
agagactatgccacagaagctgaatggaagaagtggatatggagatcagaaggtgatcta
ttcatgaacggggcctactttgttgaatccgggcaaaaattgtcgaccacaccaagcaaa
aaatatttgataaaagccaagcctggagtatatgcttcgaagattactcgctttgcaggg
gcactggattgcaagcgtggcaagaaatgttag
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