Manihot esculenta (cassava): 110601251
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Entry
110601251 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110601251
KO
K14315
nucleoporin NDC1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110601251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110601251
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110601251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
110601251
NCBI-ProteinID:
XP_021594010
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All DBs
Position
15:8092458..8097994
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AA seq
532 aa
AA seq
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MSSSPPPEVVVKNRFLGFLIWQSITSSVIFIVFKTLLISPLTYTGLAPPSFLSLLAFLIF
HLSQLFFSASLALLSSPLSYSPASPLQLAVSIIRFLFVSGDSFSSRDFRRRAKLSLGFFF
FLAAAGISGFLSVICICEWPIESSDGMQMIGRVGFRGFTFGLLYACFYIYQQRWVLEFPI
IQRPPFYSFKMSLPFAIKQTLKFSSSAYIFSAVVLVFLPNQFKTFVTMKKFIAEQIILYP
GSFSVVLCWELTHHLHQVLHAKRFIFAPPKGSAATETNPSEPLLAALEESSPGSLPQFLA
YLDLCMACENNVDAWRRAAFFEETGETYKRVIAVCLRPLEQLASTLGEGFETSVEKAYQQ
SNKQQDSKYYELFNSFQQFAWCAWTVAFLTARSRKEDRFGVAQLSGSNAAVISTLLSCLL
AVEAFMGRKTNVQTPHQLMGPGGIKWATLNTGRRDVAVAKKRSCPIHSKAYAMADVLKTS
IYYITSAFHDGMITSDKAGLLEKDWLISGKPLFGTRELLLQKLNLFLDFRAS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcaccaccgccggaagtggtggtgaagaatcgatttttaggttttctgata
tggcaatccattacctcttccgtcatcttcatcgtcttcaaaaccttgcttatctcacct
ctcacttacactggtttagcaccaccatcgttcctctcccttctcgctttcctaattttt
cacctttcgcaactcttcttctctgcatcactcgctctactctcatctcctctgtcctac
tcccccgcgtcgccattgcagctagctgtctccatcatccgtttccttttcgtgtccggc
gactctttttcttcccgtgatttccgccgccgggctaaactttctcttggtttctttttc
tttctggcggcggctggcatctcgggatttctctcggtgatatgcatttgcgaatggccc
atcgagagttctgatggaatgcagatgatcggaagagttggatttaggggttttactttt
ggattgctctatgcctgcttttatatttatcagcagcgatgggttttggagtttcccatt
attcagcggccccctttctacagcttcaaaatgagtcttccttttgccattaaacaaact
ttaaagttttcaagctcagcttacatattttcggcagttgtacttgtgtttcttccaaat
cagtttaagacttttgtaacaatgaagaagtttatcgctgagcagatcatcctgtaccct
gggagcttttctgtggtcctctgttgggaattaactcaccatttacatcaggtcctacat
gcaaaaaggttcatatttgcaccgccaaaaggatcagcagctacagaaacaaatcccagt
gaacctctccttgcagctttggaggagagcagtccaggttctcttccacaatttcttgca
tatcttgatctctgcatggcttgtgaaaataatgttgatgcttggcgccgagctgcattt
tttgaagaaactggtgagacttataagagagtcatagctgtatgtttgaggcctcttgag
cagcttgcttctactttaggtgaaggctttgaaacttctgttgagaaggcttaccaacag
tccaataagcaacaggattcaaagtattacgaactgttcaacagcttccagcaatttgca
tggtgtgcctggacagttgcattcttaactgcacgctcacgcaaggaagatagatttggg
gttgctcaactgtctggtagtaatgctgctgttatttcaacacttttatcttgcttgctc
gcggttgaagcattcatggggaggaagacaaatgtgcagacccctcatcagttgatgggg
ccaggaggcattaaatgggctactctaaacacgggaaggcgagatgttgcagtagctaaa
aagagaagttgtccgatacattcaaaggcatatgccatggctgatgtgctgaagacctca
atttactatattacatcagctttccacgatggaatgatcactagtgacaaagcgggcctt
cttgaaaaggattggcttatcagtggtaagccgctttttggaacccgtgagcttctcctg
cagaaattgaatcttttcctggattttagagctagctag
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