KEGG   Manihot esculenta (cassava): 110601293
Entry
110601293         CDS       T05761                                 
Name
(RefSeq) actin-interacting protein 1-2
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:mesc04990]
    110601293
Domain-containing proteins not elsewhere classified [BR:mesc04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   110601293
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR35_TULP_N CFAP251_N Tricorn_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_NOL10_N eIF2A Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 KNTC1_N
Other DBs
NCBI-GeneID: 110601293
NCBI-ProteinID: XP_021594068
LinkDB
Position
15:complement(10088788..10093036)
AA seq 609 aa
MADLLETFACAPSTERGRGILISGDPKTNSILYTNGRSVIIRYLDNPLKVHVYGEHGYPA
TVARYSPNGEWIASADASGTIRIWGTHNDFVLHNEFRVLSGRIDDLQWSPDMLRIVASGD
GKGKSLVRAFMWDTGSTVGDFDGHSKRVLSCAFKPTRPFRIVSCGEDFIVNFYEGPPFKF
MLSHREHSNFVNCVRFSPDGSKCISVGSDKKGIIYDGKTGEIIGHFSQEDGHTSSIYAVS
WSPDSKRVLTVSADKSAKIWEISENGSGNVTKTLECPASGGVEDMLVGCLWQNDYLVIVS
LGGTIHLFSASDLDKAPVSFSGHLKNVNALAEIKGDPKLILTSSYDGHIFKWIQGHGYKG
RVERKDNAQIKCLVAVEQEIIASGFDNKVRRIPLNGDECGPTEQIDIGSQPKDLSLATDS
PGVALVSIDSGVVLLKDLKVVSNIKLGFTVTASVIAPDGSEAIVGGQDGKLHIFSISGDN
LTEEAVLEKHRGAISVIRYSPDFSMFASGDLNREAVVWDRVSKEVKLNNMLYNTARINCL
AWSPNSSMVATGSLDTCVIVYEVGKPASSRITIKRANLGGVYGVAFTDDSTLVSSGEDAF
IRVWRLKPQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcagatctcttagaaacctttgcatgcgccccctccacagagcgtggccggggaatt
ctaatctccggcgaccccaagaccaattccattctctacaccaacgggaggtccgttata
attcggtacctcgacaaccctctgaaagtccacgtctatggcgagcatggataccctgcc
accgttgcccgctactccccgaacggtgagtggatcgcatccgccgacgcttccggtact
attaggatatggggtacacataatgattttgtgctgcataacgaatttcgcgtcctatcg
ggtcggatcgatgatttgcagtggtctcctgatatgttgaggattgttgcgtccggtgac
ggcaagggaaagtccctcgtccgtgctttcatgtgggatacgggcagtactgtaggagat
tttgatgggcactcaaagcgggttttaagttgtgcatttaaacctacaaggccattccga
attgtcagttgtggagaggatttcatagtgaacttttatgaaggtccaccctttaagttc
atgctgtcccacagagagcattccaattttgtcaattgtgttagattttcaccggatggc
agtaaatgcattagtgtaggctcagataagaagggcataatatatgacgggaagactggg
gaaataattggacatttttcccaagaagacggtcatacatccagcatctatgctgttagt
tggagtcctgatagtaaacgggtacttactgtctcagctgacaagtcggcaaagatatgg
gaaatttctgagaatggaagtgggaatgtgacaaaaacattggaatgtcctgcttctggt
ggagtggaagatatgctggttggatgtctttggcaaaatgattatcttgttattgtttcc
cttggtggcacaattcacttattttctgctagtgatcttgataaagctccagtatccttt
tctggacacctgaaaaatgtcaatgcattagcagagatcaagggtgatccaaagttgatc
ctgacgagcagttatgatggacacatttttaagtggattcaaggtcatgggtacaagggt
agagtagagcggaaagataatgctcaaattaaatgtttagtagctgtcgaacaagagata
attgcatctggatttgacaataaggtacgcagaattcctctaaatggggatgaatgtgga
ccaacagagcagattgacattggcagtcagcctaaggatttgagccttgcgactgactcc
cctggagtagctttggtttcaattgattcgggagttgtcttgcttaaagatctgaaagtg
gtgtcaaacatcaagctcggatttactgtgactgcatctgttattgcacccgatggaagt
gaagcaattgtgggtggccaagatggtaaattgcacatattctcgatttctggtgataat
cttactgaagaagcagttcttgagaagcacagaggtgccatcagtgtaatacggtattct
ccagatttctccatgtttgcctcaggtgacctgaaccgagaagctgttgtttgggatcgt
gtctccaaggaggttaaacttaataacatgttgtacaacactgctcgtataaactgcctc
gcatggtctcctaatagctctatggtggctactggatcactagatacatgtgtcatagta
tatgaagttgggaagcctgcttcaagccgcataaccataaaacgggccaacttgggtgga
gtttatggcgttgcatttactgatgattccactttggtgagctcaggggaggatgccttt
attcgtgtttggaggttaaaaccacagtaa

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