Manihot esculenta (cassava): 110601361
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Entry
110601361 CDS
T05761
Name
(RefSeq) la-related protein 6C
KO
K15191
La-related protein 7
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110601361
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
110601361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
PAM2
Whi3-like_N
IpaB_EvcA
RRM_MUD2_C
RBD_AKAP-17A
SNU71_RBD
HENMT1_C
Motif
Other DBs
NCBI-GeneID:
110601361
NCBI-ProteinID:
XP_021594164
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Position
15:complement(11756271..11760075)
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AA seq
441 aa
AA seq
DB search
MAQAQPHRKIEEEEEEEISHHHMDLKEIIKSKPSQSISCSSSSTSSPCSFKFNVQAREFV
PRSHSPSTAAQTQMPISGYFYPCFHYLGATAGSDWFFLGEQDPHAYLISNPNLALPNSSN
KTTLLTDDLRQKILKQVEYQFSDLSLLANESMSKNISKDPEGYVPISVIASTKKMKSLVN
NNQLLAQALQSSAKLVVSEDGKRVKRKIPFTEKDREELQSRTVVVENLPEDHSHQNLEKI
FSVVGSVRTIRICHPQESNSSRSKSDFFMSNKLHALVEFENLDTAEKAVEKLNDERNWRK
GLRVRVLLRCSPKSVLKSRKSDFDVLLDEEDFPAPESNEGSPPIHQIHNAECIAESINVE
ENSGPLKKGWARGRGKGKGRGQSHGGRGLLAPFPLSVSSPQCEASAKQASKGPRMPNGTR
GFTMGRGRPLGSPALACSMLE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagcacagccccatcgcaagattgaagaagaagaagaagaagaaatctcccat
catcacatggatttgaaagaaattatcaaatccaaaccatctcagagtattagttgtagc
agtagtagtaccagttctccttgttctttcaaattcaatgttcaggcacgtgaattcgtc
cctagatcgcattctccgtccaccgccgctcagactcagatgcctatttctggttatttt
tatccttgctttcattatcttggtgctactgctggatctgattggttttttcttggggaa
caagaccctcatgcctatttgatctctaatccaaatcttgctttgcccaattcctccaat
aagactactctccttactgatgatcttcgccaaaagatcctcaaacaggtggagtaccag
ttcagtgatctgagccttcttgcaaatgaatccatgtcaaaaaacataagcaaagatcct
gaaggttatgtaccgatatctgtgattgcttccacaaagaaaatgaagtcccttgttaat
aataaccaattgcttgcccaagcacttcagtcctctgcaaaacttgttgtcagcgaagat
ggcaagagagttaaacgtaaaatcccttttactgagaaagacagagaagaattgcagtct
cgtactgttgtggtggagaatttgcctgaagatcactctcatcaaaaccttgagaaaatt
tttagcgtggttggaagtgtaagaaccatcagaatatgtcatcctcaagagtctaattct
tctcgtagtaaaagtgattttttcatgagcaacaagctacatgcacttgtggagtttgag
aatctagatacagcagagaaagcggttgagaagttgaatgatgaaaggaattggaggaaa
ggcctccgagtcagggtgctgctcagatgctcaccaaaatctgtcctcaagagcagaaag
tctgactttgacgtcctgttggatgaagaagactttccagctccagaatcaaatgaaggt
tctcctccgattcatcagattcacaatgcagaatgtatcgctgagagtattaatgtggaa
gaaaattcagggccattgaagaagggatgggcaagaggtcgtggcaagggcaaaggacgt
ggtcaaagccatggtggtcgaggcctgcttgccccgtttccactgtctgttagctctccc
caatgtgaagcatctgctaaacaggcctccaagggtccaagaatgcctaatgggacaagg
ggtttcaccatgggccgtgggaggccactaggaagtccagctctggcctgttcaatgcta
gaataa
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