Manihot esculenta (cassava): 110601384
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Entry
110601384 CDS
T05761
Name
(RefSeq) putative E3 ubiquitin-protein ligase RF298
Organism
mesc
Manihot esculenta (cassava)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PIR2-like_helical
zf-C3HC4_3
zf-UDP
Prok-RING_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110601384
NCBI-ProteinID:
XP_021594187
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Position
15:complement(1657611..1662061)
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AA seq
885 aa
AA seq
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MASMVAIASISNCSSQVSPLHPVQENGSRNKRKFRADPPLGDPSKVMPSPQNDCSGYEFS
AEKFEALPVHGPSSSCQCGINQDNSDGLKVGTSRVGLLEVGTSRSKEELESEESHDADWS
DLTESQLEELVLGNLDAIFKSAIKKIVAFGYTEEVATKAVLRSGLCYGCKDTLSNIVDNT
LTFLRNGQDIDPSRGQCFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNVS
LACAVDGESLTGFAADGASAPSIQPQMKKEGKYSELNLPNPCKFEPSVPCSPSSESEAPN
NMTGVPNTTKTSNSGVLSELVSDKNQLNSTCDPADKSFNIAGTSQPPVFEEKFTVSRKVH
SNSSKREYILRQKSLHLDKGHRTYGPKGSRTGKLSNLILDKKAKSVSDSALKINDASLRL
SKVMGVDVPQDKGGQNLSNNPGCSPPAASNLGTSIVTSLSETDVPSTLSMVNIPSALPTL
NTPPALAATDIELSLSLPSKGNCAPISANCNAEASNCSFAGIPYDKSVAPWIPRNKKDEM
IMKLVPRVRELQNQLREWTEWANQKVMQAARRLSKDKAELKSLRQEKEEVEWLKKEKQTL
EENTMKKLAEMENALGKAGGQVERANSAVRRLEVENAMLRQEMEAAKLRAAESAANCQEV
SKREKKTQLKFQSWEKQKTLLQEELAAEKCKVMQLLQDLEQARQLKEQLEARWQQEEKAK
EELVLQASSIRKEREQIEASTKSEEDTIKLKAETNLQKYKDNIEKLEREISQTDSSKIAA
LRLGINESHGSRVTDVKYSPAKEVRRPYYSVMDGDVEKYLNTGGVKRERECVMCLSEEMC
VVFLPCAHQVVCSTCNELHQKQGMKDCPSCRTPIRRRILVSYACS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatggttgctatagccagtattagtaactgtagcagtcaagtgtcaccactg
catccggtccaagaaaatggaagcagaaataagagaaaattcagggctgatccacctttg
ggtgatcccagcaaggttatgccttcacctcagaatgactgctctggttatgaattctct
gctgagaaatttgaagctctcccagttcatgggccatctagttcatgtcagtgtggcatt
aaccaagacaattctgatgggttgaaggttggaacaagccgggtaggattgttggaggtt
ggaacaagccggtctaaagaggaattagaatcagaagaatcccatgatgctgattggagt
gatcttacagaatcccagctagaagaacttgtgttaggcaatttggatgcaatctttaag
agtgccattaaaaagattgttgctttcggttatactgaagaagttgctacaaaggctgtt
ttgaggtccggtctttgttatgggtgtaaagacaccttgtcaaatattgtggataatact
ttaacatttcttaggaatggtcaagatattgatccttcaagggggcaatgttttgaggat
ttacaacagctggagaagtacatattggcggaattggtttgtgtacttcgagaagttagg
cctttctttagcactggggatgcaatgtggtgcttattgatttgtgatatgaatgtttct
cttgcttgtgcagtggatggtgaatccttgactggttttgctgctgatggggcttccgct
ccttctatccaaccccagatgaaaaaagaaggcaaatattctgaattgaatcttccaaat
ccttgcaaatttgaaccttctgttccttgttctcctagttctgaatctgaggcacccaac
aatatgacaggagttcccaacacaactaaaacaagcaactctggtgttcttagtgaacta
gtctcagacaaaaatcaattgaattctacatgtgatcctgcagataaatctttcaacatt
gcaggaacttctcaacctcctgtgtttgaagaaaagtttacagtcagtagaaaggttcat
tccaatagcagcaagagggaatacatacttcgacagaagtcacttcatttggacaagggc
cacagaacatatgggcctaaaggatcaagaacagggaaattgagtaatttgattttggat
aagaaagcaaaatcagtttcagattctgccctaaaaataaatgatgcttctttaagattg
agtaaggtaatgggagttgatgtgcctcaagacaaaggaggccagaatctttcaaataat
cctggatgctctcccccagcagcatctaatttaggaacttctattgtgacttctttgtca
gagactgatgtcccatctacactatccatggtcaacatcccatctgcattacctacactc
aatactccacctgcattggcagctactgatattgagctatcactttcattgccttcaaaa
ggcaactgtgctccaatctctgctaattgtaatgctgaggcatctaattgcagttttgct
ggtataccatatgataagtcagtggcaccatggattccaaggaacaagaaggatgagatg
attatgaagctggtccctagggtacgggaattgcaaaatcagctccgagaatggacggaa
tgggcaaaccagaaagttatgcaggctgctcgaaggctaagtaaggataaggctgaactt
aagtcacttagacaggagaaggaagaagttgaatggctcaagaaagagaaacaaactctg
gaagagaacaccatgaagaagctcgctgagatggaaaatgcattgggcaaggctggtggt
caggtggagagagctaattctgctgtccggaggcttgaggtggagaatgctatgctgagg
caagagatggaggctgcaaaattgcgtgcagcagagtcagctgcaaactgtcaagaagta
tcaaagagggagaagaagacgcagttgaagtttcagtcatgggagaagcagaaaaccctt
ttacaggaagaacttgcagctgaaaaatgcaaggtcatgcaactactacaggatttagaa
caagctaggcaactaaaggaacaacttgaggctagatggcaacaagaagagaaggcgaag
gaagaactagttttgcaggccagttcaataagaaaagaaagggaacaaatagaggcatca
actaaatctgaggaggatacaattaaattgaaagctgaaactaatttgcagaagtacaaa
gataacattgagaagcttgaaagagaaatatcccagacggactcgtcaaaaattgcagcc
ctgcgactgggcatcaatgaaagccatggtagcagagtaacagatgttaagtatagtcca
gcaaaggaggtgaggaggccttattactcagtaatggatggtgatgttgagaaatactta
aacacaggaggagtgaaacgggagagagaatgtgtgatgtgcctctcagaggagatgtgt
gtagttttcctcccatgtgcccatcaagtagtttgctcaacatgtaatgaactacatcag
aaacaaggaatgaaggattgcccttcttgtagaacccccattcggcgtcgtattcttgta
agttatgcttgctcttaa
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