Manihot esculenta (cassava): 110601418
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Entry
110601418 CDS
T05761
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110601418
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110601418
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_14
AAA_22
AAA_23
AAA_16
AAA_28
AAA_27
AAA_30
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
110601418
NCBI-ProteinID:
XP_021594234
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Position
15:complement(15189320..15193775)
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AA seq
596 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAASSKAAASADNGSVDKLSSGVGAIQISDRTCTGV
LCSHPLSRDIRIESLSVTFHGHDLIVDSLLELNYGRRYGLLGLNGCGKSTLLTAIGCREL
PIPDHMDIYHLSREIEASDMSALQAVISCDEERLKLEKEAEILSAQDDGGGETLERIYER
LEAIDASTAEKRAAEILYGLGFNKQMQAKKTQDFSGGWRMRIALARALFMNPTILLLDEP
TNHLDLEACVWLEETLKRFDRILVVVSHSQDFLNGVCTNIIHMQSKKLKIYTGNYDQYVQ
TRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV
VRDKVLVFRFVDVGKLPPPVLQFVEVKFGYTPDNLIYRNLDFGVDLDSRIALVGPNGAGK
STLLKLMTGDLAPSDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMIKEYPGNEEERMR
AAIGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLAE
ALNEWDGGLVLVSHDFRLINQVAEEIWVCENQAVTRWEGDIMDFKEHLKKKAGLSD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgccagcaagaagaaggccgcacaaaagaaggcggcggcggcggccaag
aggggtggaaaggcagctgcatcgtctaaagctgctgcttcggctgataatggaagtgtc
gacaagttgtcgagtggagttggggctattcagatatcggatcggacttgtactggcgtg
ctatgttctcatcctctttccagagatattcgcattgagtctttatcagttactttccat
ggacatgacctcattgtggattctttgcttgagcttaactatggcaggcgatatggattg
ctgggattaaatggatgtgggaaatcaacactcttgactgcaataggttgccgtgagctt
ccaattccagaccacatggatatatatcacctctcaagagaaattgaagcttctgacatg
tctgcacttcaggctgtcattagctgtgatgaggagaggttgaaactggagaaggaagct
gaaattttatctgcacaggatgatggaggtggagagactcttgaacgtatatatgaacgt
ttggaggctatagatgcatctactgcggaaaaacgtgctgctgagatattgtatggtctg
ggtttcaacaagcagatgcaggcaaagaaaacccaggatttttccggtggctggaggatg
aggattgcattggcacgggctcttttcatgaaccctacaatccttttgcttgatgaacct
accaatcatcttgatttagaagcttgtgtctggttggaggagactttgaagagatttgat
cgcattctagttgtggtgtctcactcccaggatttcttgaatggtgtttgcacaaatatt
atacacatgcagagcaagaaattgaagatctacactgggaactatgatcaatatgttcag
acccgatctgaactggaggagaatcagatgaaacagtacaagtgggagcaggagcagatt
gcttcaatgaaggagtacattgctagatttggacatggttcagcaaaattagcccgtcaa
gcacagagcaaggagaaaacacttgcaaaaatggagcgaggggggctcacagagaaggtt
gtcagagacaaggttctggtctttcgatttgttgatgttgggaagctgccaccacctgtg
cttcagtttgtggaagttaaatttggatatactcctgataatctcatctacaggaacctt
gactttggggtagatctggactctaggattgctctggttgggccaaatggtgctgggaag
agcacattactgaaacttatgactggagatttggcccctagtgatggcatggttcggcgg
cacaatcacttgagaattgcgcaatttcatcagcatttggccgagaaacttgacttagat
atgtctgccttacaatatatgataaaagaatatcctgggaatgaggaagaaagaatgaga
gcagcaattgggaagtttgggttgactggcaaagcgcaggtgatgccgatgaagaatttg
tctgatgggcagaggagccgcgtgatttttgcatggttagcttataggcagccgcagctg
ctgctgttggatgagccaacaaaccatttggatattgagaccattgactctctggccgag
gcattaaatgaatgggatggtggtctggttctcgtcagccatgattttaggcttataaat
caggtggcggaggagatatgggtgtgtgaaaatcaagctgttacccgatgggagggtgat
atcatggacttcaaagagcacctcaagaagaaggctggcttatctgattga
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