Manihot esculenta (cassava): 110601437
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Entry
110601437 CDS
T05761
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110601437
Membrane trafficking [BR:
mesc04131
]
Protein recycling
Others
EARP complex
110601437
Endosome - Golgi transport
Tethering complex
GARP complex
110601437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
110601437
NCBI-ProteinID:
XP_021594256
LinkDB
All DBs
Position
15:complement(8099217..8112468)
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AA seq
708 aa
AA seq
DB search
MSAVRCLFVQGQSGSIMDYTPRNVFDLGAFVGDLTLEEDTSSDEISLEGLEQELQGCKND
DVVANILSKGTTLRDYTKGVENNLRQAELDSIQDYIKESDNLVSLHDQIRDCDSILSQME
TLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMIDIIVD
GEVNEEYLRTLEILSKKLKFIEVDPLVNGSKALKDVQPELEKLRLKAVSKVFEFIVQKLH
ALRKPKTNIQILQQSVLLKYKYVISFLMEHGKEIYTEVRGAYIDTMNKVLSAHFRAYIQA
LEKLQLDIATSSDLIGVETRSSGLFSRPREPLKNKSAVFALGERSNILKEIDQPALIPHI
AEASSQKYPYEVLFRSLHKLLMDTATSEYLFCDDFFGEESIFYEIFAGPLAVVDEHFNSR
LPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDLHLGSLRN
ANVKTLWEDDVHPHYVMRRYAEFTASLIHLNVEYGDGQLELNLERLRMAVDDLLIKLAKT
FAKPKQQIVFLVNNYDMTISVLKEAGPEGGKIQMHFEELLKSNTALFVEELLLEHFSDLI
KFVKTRASEDPNSSSEKPITIAEVETIVKDFASRWKAAIELMHKDVITSFSNFLCGMEIL
RAALTQLLLYYTRLSDCIKRIAGGSALNKDLVSISSIMYEIRKYSRTF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgttcgttgtttatttgtgcagggtcaatctggaagtattatggattatacg
cctagaaatgtatttgatttaggtgcgtttgttggggacttgactcttgaggaggatacc
agcagtgatgaaatctcattggaaggtcttgagcaagaattgcaaggatgcaaaaatgat
gatgtagttgcaaacatactgtctaaaggcacaacattaagagactatacaaagggggtt
gagaacaatttgcgacaagctgaattagactccattcaggattacataaaagaaagtgat
aatctggtgtcccttcatgatcaaattcgtgattgtgatagcatcttgtcacagatggaa
actcttctcagtggatttcaggctgagattggttctataagttcggatatcaaaattctc
caagagaagtctatggatatgggtttgaaattgaagaatcgcaaggtggctgaatcaaag
ctggcaaaatttgttgaagacattatagttcctcctagaatgatagacataattgtcgat
ggagaggtcaatgaagagtatttgagaactcttgaaattcttagtaagaagttgaagttc
attgaagtggatcctttggttaatggctcaaaagctctgaaagatgtgcagcctgagctt
gaaaagctaaggctgaaagctgtttctaaggtctttgagttcattgttcagaagcttcat
gcattgagaaaacccaaaacaaatattcagattcttcaacagagtgttcttttaaaatac
aagtatgtcatttccttcctcatggagcatggcaaggagatatataccgaggttcgtgga
gcatacattgacacaatgaacaaggttttaagtgctcatttccgtgcttatattcaagcc
ttggagaaactacagttagatatagcaacatccagtgatttgattggtgtggagaccaga
agcagtggccttttctctagacctagagaaccactaaagaataaatcagcagtttttgct
ttgggggagaggagtaatattttaaaggaaattgatcaaccagcattgattcctcatata
gctgaagccagctcccaaaagtatccttatgaggtcctcttcaggagcttgcacaagttg
ctaatggatactgcaacttcagagtatcttttctgtgatgatttctttggggaagaatct
attttttatgaaatttttgctggtccacttgcggttgttgatgaacacttcaattcaaga
cttcctaattgttatgatgccataggcctcatgcttatgattcgcatcatacatcaacat
cagcttatcatgtctcggcggcggattccatgcttggactcatatttggacaaggtcaat
atctctttatggcctcgtttcaagatggtatttgatttgcaccttggcagcctgcggaat
gcaaatgtgaagacattgtgggaagatgatgttcatcctcattatgtcatgaggcgttat
gctgaatttacagcatctcttattcatcttaatgttgaatatggagatgggcagcttgaa
ttgaatttggaacggctaagaatggctgttgatgatttgctcatcaagcttgctaaaaca
tttgcaaaacctaaacaacaaattgtgtttctcgtaaacaattatgatatgacaatttct
gtactgaaggaagctggtcctgaaggtgggaaaattcaaatgcattttgaggaactgctg
aaaagcaatacagcgttatttgtggaagagctgctattagagcattttagtgacctcatc
aagtttgtcaagacccgagcctcggaggatccgaattcaagttctgagaagcccataact
attgctgaagttgagacaattgtaaaagattttgcaagtagatggaaagctgcaatagag
ctgatgcataaagacgttatcacttctttcagcaactttttatgtggtatggagatcttg
agggcagcattgacccagctcctgctatattatactaggctttcagattgcataaagagg
attgctggtgggtctgcactgaacaaggatcttgtgtccatttcttcaatcatgtatgag
atcaggaaatattcaagaactttctag
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