Manihot esculenta (cassava): 110601452
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Entry
110601452 CDS
T05761
Name
(RefSeq) uncharacterized RING finger protein C548.05c isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110601452
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110601452
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110601452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-Nse
zf-rbx1
zf-RING_10
zf-RING_4
Sina_RING
zf-ANAPC11
Prok-RING_4
zf-RING_11
Zn_ribbon_6
FYVE
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110601452
NCBI-ProteinID:
XP_021594289
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Position
15:4287634..4290661
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AA seq
223 aa
AA seq
DB search
MDSWGLNCLEGNMTNSQRRTLDLDLDLNYPLPPPMRALDLSLGLSIHSSSQEVQTQMRGW
SHHQTTNVIRAIDDEVTIISPRTFSQARENSERNHSHGMHEVIVEDTVTVRETAMTSLCT
DCKRRLSDGCDPYLKPGTSSKKKATNVSMIQKLSQSVPMPDEPTFSCPICMSPFTEPTAT
RCGHIFCKECLLKSLKSLHNKCPTCRQKVGKRGIFRIYLPSTN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggattcatggggactgaactgtttagaagggaacatgactaactctcagagaagaaca
ttggatctagatttagatcttaactatccccttcctcctccaatgagggctcttgactta
tcacttgggttatccattcattctagttctcaagaagttcaaactcaaatgcgtggatgg
tctcatcatcaaactacaaatgtcatcagggccattgatgatgaagttactataatctcc
ccaaggacattttctcaagcgagggaaaattctgaaagaaaccattctcatggaatgcat
gaagtgattgttgaagatactgtaactgttagggaaacagctatgaccagtttatgcacc
gattgcaaaagaagattatctgatggatgtgatccttacttgaaaccaggaacaagtagc
aagaaaaaggcaactaatgtttctatgattcaaaaattgtcccagtctgttcctatgcct
gacgaacctacattcagttgcccaatatgtatgagcccctttactgaaccaactgcaaca
aggtgcggccatatcttctgtaaggagtgcctcttgaaatcgctaaaatcattacataac
aaatgcccaacctgccggcaaaaggttggaaagcgaggcatctttaggatttaccttcct
tcaaccaactga
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