Manihot esculenta (cassava): 110601489
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Entry
110601489 CDS
T05761
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110601489
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
110601489
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110601489
NCBI-ProteinID:
XP_021594331
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Position
15:complement(889497..891245)
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AA seq
405 aa
AA seq
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MAITKKLLPNAILLFCVALASCDKRSSIRPGRRRYSNEKIFNVVQFGAKTDPEKDNALAF
IQAWNAACNWKGKARVLVPKGAFVASSMVFGGPCKNKAPTVFQLVGTLKAVSNLSSYAED
FWMIFRNVNGLVITGTGTVDGQGPNVWKYNDHGDGGRVFPASIKFHRVRDGVIRQVSSVN
PMGFHIGIVLSKNITAKSLHLTAPEDSPNTDGFHISQSNQVKIATSVIATGDDCVGMIQG
STDISIKEVTCGPGHGISIGSLGKYPDEKDVKGILVTNCTLRNTENGIRIKTWAGSPPSQ
ATALTFQDIVMHNVRNPIIIDQSYGSNSNKPSKVRISDVKYINIKGTTSSEVGVNFECSK
QFPCQRVHLANIKLEYTGDKKQALSATCQNARVSYAGIQFPPPCR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccataacaaagaaactcttgccaaatgccattcttctcttttgcgtagcgttggcc
tcttgtgataagcgcagttccatacgccccggtcgtagaagatactccaatgaaaaaatc
ttcaacgtcgtacaatttggtgcaaaaactgatccagaaaaggataatgcactagctttt
attcaggcatggaatgctgcatgcaactggaaagggaaggcaagggtacttgtcccgaag
ggggctttcgtagcctcttccatggtttttggcggaccatgcaaaaataaagctcccact
gtttttcaacttgtaggaactctcaaggcagtatcaaatttgagcagctatgcagaagat
ttttggatgatattccgaaatgtaaatggcttggtgattactggaactggcaccgtcgat
ggccaaggccctaatgtatggaaatataacgatcacggagacggaggcagagtttttcca
gcatccattaagttccatcgtgtgagagatggagttataaggcaagtcagttctgttaac
cccatgggattccacatcgggattgttctcagcaagaatattacagccaaaagtctccat
ttaacagctcctgaagatagccccaacactgatggtttccatatcagccaatccaatcaa
gttaaaatagctacaagtgtcattgctactggagatgattgtgtcggaatgattcaagga
agtaccgacattagcatcaaggaagtgacctgtggtcccggacacggcatcagtattggt
agtcttgggaagtacccagatgagaaggatgtgaaaggcatccttgtgacaaactgcacg
ctaaggaacaccgaaaatggaatcagaatcaaaacatgggcaggatcacctccaagccaa
gcaacagccttgactttccaggacatcgttatgcataacgttagaaaccccatcattatt
gatcagtcctacggatctaactcaaataagccatcaaaggtacggatcagcgatgttaaa
tacataaacatcaagggaaccacaagctcagaagttggagtgaattttgagtgcagcaag
cagttcccctgtcaaagagttcatttggcaaacatcaaactggaatatacaggtgataaa
aaacaagctctctctgctacatgccaaaatgcaagagtaagctacgcaggcattcaattc
ccaccgccgtgccgatga
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