Manihot esculenta (cassava): 110601546
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Entry
110601546 CDS
T05761
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110601546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110601546
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110601546
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
110601546
NCBI-ProteinID:
XP_021594409
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Position
15:complement(6357523..6362526)
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AA seq
691 aa
AA seq
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MATDHQENSSAAHMQDFTDEDSQNEGVLEDEDEEEEEEEEEEEEEGTTQDCRSKLFMCGG
YGGDSRRRGWFLGKMLDPRARWVQEWNRVFLLVCATGLFVDPLFFYALSVSDTCMCLFID
GWFAITVTVLRCMTDALHLWNMWLQLKMDRKPSSGGGGENNGTRSGPRSMTSPSSVALMY
LKAKRGFFFDLFVILPLPQIVLWVAIPSLLEKGSVTVVMTIFLIIFLFQYLPKIYHSVCL
LRRMQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCRETQGCG
LRLLSCRETIYYGTTNKVRDGARLAWADNKVARATCLDSSDNYDYGAYKWTVQLVTNDSR
LEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS
KKQAMQLKMRNIEWWMRKRHLPQGFRHRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDI
KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ
SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTQETTEAFGLEAED
VKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRP
LSRCSSLGEDRLRLYTALLTSPKPNQDDFDF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatcatcaggaaaactcaagtgcagcacatatgcaggatttcacagacgag
gatagccagaacgaaggagtactagaagatgaagacgaagaagaagaagaagaggaggag
gaggaagaggaagaaggaaccacacaggattgcaggagtaagctctttatgtgtggcggt
tatggtggtgattctcgaagaagagggtggtttttagggaaaatgttggaccctcgagcc
agatgggttcaagaatggaatagagtttttcttcttgtgtgtgccaccggactatttgtg
gaccctctctttttttacgctctgtctgttagcgatacctgcatgtgcctcttcatcgac
gggtggtttgctatcacggtaacggttctccggtgcatgactgacgccttgcacctgtgg
aacatgtggttgcagctcaaaatggacagaaaaccatccagtggtggtggtggtgagaat
aatggaactagaagtggaccacgctcgatgacaagccctagttcagtggccctgatgtac
ctgaaggcaaagagaggatttttctttgatctgtttgtgattctccccctaccccagatt
gtgctatgggtagcaattccatcattattagagaaagggtcagtaactgtagtgatgacc
atattcttgatcatattcctctttcaatatcttccgaagatctaccactcggtttgcctt
cttcgacgcatgcagaatctctcaggctacatatttggaactgtttggtggggaattgcc
ctcaacatgattgcatattttgttgcttctcatgcagcaggtgcatgctggtacttgcta
gggatccaaagggcagcaaaatgcttgaaagaacaatgcagagaaacacagggatgcggg
ctgaggttattatcttgtagagaaactatttactatggaacaacaaataaggtgagagat
ggagcaagattagcatgggcagacaacaaggtggcaagggctacctgcttagacagcagt
gataattatgactatggagcttataaatggactgttcaactcgttaccaatgatagcaga
ttggagaaaatactttttcccatcttttggggtctaatgactctcagcactttcggaaac
ctggagagcacaacagagtggttggaagttgttttcaatatcattgttctaacaagtgga
ctccttttggtcacgatgttgatcggaaatatcaaggttttcttgcatgcaaccacatca
aagaagcaagcaatgcagttgaagatgaggaacatagagtggtggatgaggaagagacac
ttgcctcaaggattcaggcaccgtgtccgtaactatgagcggcagcgctgggcagcaatg
cgcggcgtcgatgaatgtgaaatgatcaggaacctccctgaaggacttaggagggacatc
aagtaccatctctgcctggatttagtgaggcaggtaccacttttccaacatatggatgat
cttgtcctagagaacatttgcgaccgtgtgaagtctctcattttcacgaagggagaaaca
ataacaagagaaggcgaccctgtccaaagaatgctatttgtggtaaggggtcatcttcaa
agtagccaagtgcttagagatggagtcaagagttgctgcatgttaggtcctgggaatttc
agtggagatgaactcttgtcatggtgcctaagaagaccgtttatagaacgtttaccacca
tcctcatcaacactggtaactcaggagaccacagaggcatttgggctagaagctgaagat
gtgaaatatgtgacgcaacatttcagatacacatttgtgaatgaaagagtgaagagaagt
gcaagatactattcaccaggatggagaacttgggcagctgtggccattcagttggcttgg
agaaggtataagcaccgcttgacgcttacttcattgtcatttatcaggccaagaagacct
ttgtctcggtgctcttccttaggggaggataggctcaggctttatacagctttgttaact
tcaccaaagccaaatcaggatgatttcgacttctga
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