Manihot esculenta (cassava): 110601580
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Entry
110601580 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110601580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110601580
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110601580
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110601580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
PHD_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
110601580
NCBI-ProteinID:
XP_021594491
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All DBs
Position
1:complement(36151575..36158360)
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AA seq
328 aa
AA seq
DB search
MMELDGIECVSSSDGFDEDEIYQHHQFSSSKSRNATANYNNNNNINNVIGSTAIAPATNV
HELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVHNRCPTCRQELGDIRCLALEKVAESL
ELPCKYCNLGCLEIFPYYSKLKHEVVCNFRPYNCPYAGSECSTVGDIPFLVSHLKDDHKV
DMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
DEAEARSYSYSLEVGANGRKLTWEGAPRSIRDSHQKVRDSHDGLIIQRNMALFFSGGDRK
ELKLRVTGRIWKEQQNPEPNACMPNLCS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttggatggtatcgagtgtgtgtcatcctctgatgggtttgacgaggatgag
atctatcagcaccatcaattttcttcatcaaagtctcgcaacgccaccgccaattataat
aataataataatatcaataatgtcatcggttcaactgcaatcgctccggccaccaatgtc
catgagttgctagaatgccctgtttgcaccaattccatgtacccaccaattcaccagtgt
cataatggccacacactgtgttccacctgtaaaataagggtacacaataggtgccccact
tgtcgacaggagctcggagatattagatgtttagcactagaaaaggtggccgagtcactt
gaattgccatgcaaatattgcaacttggggtgcctggaaatatttccatattacagtaaa
cttaagcatgaggtagtttgcaacttcaggccatataattgtccatatgctggatcagaa
tgctctactgttggagatattccttttctagtgtctcatttgaaggacgatcacaaggtg
gacatgcacactggatgcactttcaatcatcgttatgtgaaatcaaatccccgggaggtg
gagaatgctacttggatgctgacggtatttaattgttttgggcaatatttctgcctgcac
tttgaagccttccagctagggatggcccctgtttacatggcattccttcgtttcatgggg
gatgaggcggaggctcgtagttacagctatagcctggaggtaggagctaatgggcggaaa
ctcacatgggaaggtgctccgagaagcatcagggatagccatcaaaaggtgagggacagt
catgatggtctgattattcaaagaaatatggctcttttcttttctggaggtgataggaaa
gaacttaagcttagagttactggaaggatttggaaggaacaacagaatcctgaacccaat
gcctgcatgccaaacctctgcagctaa
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