Manihot esculenta (cassava): 110601583
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Entry
110601583 CDS
T05761
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110601583
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110601583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110601583
NCBI-ProteinID:
XP_021594455
LinkDB
All DBs
Position
15:complement(11470020..11482193)
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AA seq
778 aa
AA seq
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MKRAFDEISDDEWENHSFKPSRVLKTSTSNRHRHKSAQPPPPIESFVFKKPVDTLNSDSS
SSSSGDCREITPPFNLEEEDGNLEDDDVVKDDCEEVARPAPANRGRRFVVDDDDEEEEED
EEDEERKEVESERDFAEVYDIESSGDDDYDGEEEEEDLKLEEDDVVGKALQKCAKISAEL
KRELYGSGVTSCERYAEVEASSVRIVTQSDISAACAVVDSDFQPVLKPYQLVGVNFLLLL
YRKGIGGAILADEMGLGKTIQAVTYLMLLKHLNNDPGPHLIVCPASLLENWERELKKWCP
SFSVLQYHGATRAAYSKELSSLSKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWQW
SCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFA
TEDVDVDLKKLLNAEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKRQRVEYVFMEKHQE
DAYKEAIEEYRAASRARIAKLSDVDLNATFRILPQRQISNYFVQFRKIANHPLLVRRIYT
DDDVVRFAKKLHPIGAFGFECTLDRVIEELKTYNDFSIHRLLYQYGVKDAKGILSDKHVM
LSAKCRALGELLPALRKDGHRVLIFSQWTSMLDILEWTLDVIGLKYRRLDGSTQVTDRQT
IVDDFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTKP
VTIYRLVTKGTVDENVYEIAKRKLILDAAVLETGVEVDNEGDTSEKTMGQILSSLLMG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgctttcgacgaaatctccgacgacgagtgggagaaccactctttcaagccg
tcgcgcgtccttaaaacgtcaacgtctaatagacataggcataaatccgctcaaccgcct
cctcctatagaatcattcgtttttaaaaagcctgtagatactctcaattccgacagcagc
agtagcagcagtggtgattgccgagaaattactccgcctttcaatttggaggaagaagat
gggaatttggaagatgatgacgttgtaaaggatgattgtgaggaggtggcgaggccggct
ccggcgaatcgtggccgtcgatttgtagttgatgatgatgatgaggaggaggaggaggat
gaggaggatgaggagaggaaggaggtcgagagtgaaagggattttgccgaggtgtatgat
atagagtcgagcggcgacgacgactacgacggcgaggaggaggaggaggacttgaagttg
gaagaggatgatgtggtgggaaaggctttgcaaaagtgcgctaaaatatcggcggagctg
aaaagagagctgtatggctctggagtcacctcgtgtgagcggtacgccgaggtggaagct
tcttcagtgaggattgtgactcagagtgatatttctgcagcatgtgctgtggtggattca
gattttcagcctgtactcaagccatatcagctggttggtgtgaactttcttcttctgctg
tatcgaaagggcattggaggagctatattggcagatgaaatgggccttgggaagactatt
caggcagttacatatttaatgttgttgaaacacttgaacaatgaccctggtccacattta
attgtatgtcctgcctctttattggaaaattgggaaagagaacttaaaaagtggtgtcca
tcattttctgtactccagtatcatggggctactcgagctgcctactcaaaagagttgagc
tctttgtccaaagccgggttgccacctccatttaatgtgcttcttgtttgttactcgctc
tttgaaaggcacagtgtccagcagaaggatgaccgtaaaattctaaaacggtggcaatgg
agctgtgttctcatggatgaggcacatgctttgaaggataagaacagctataggtggaaa
aacctgatgtcagttgcaagaaatgcaaaccagcgtttgatgctaacagggacaccccta
cagaatgatttgcatgagttgtggtccttgttggagtttatgatgcctgatctttttgcg
actgaggatgtagatgtagatttgaaaaagctactaaatgcagaagatagagatttaatt
ggtcgtatgaagtctatcttgggaccattcatcttgaggcgtttaaaatctgatgtaatg
caacaacttgttccaaagagacagcgggttgaatatgttttcatggaaaagcatcaagaa
gatgcttataaagaagctatagaggaatatcgtgcagcttcacgtgctcgtattgcaaag
ctttcagatgttgacttgaatgctacttttcgaattcttcctcaacggcagatatcaaat
tactttgttcagtttcgcaagatagcaaaccatccattactagtgaggagaatttatact
gatgatgatgttgttcgttttgccaagaagttgcatccaattggtgcttttggctttgag
tgtacgttggacagagttattgaagaactaaagacctacaatgacttttccattcaccgg
cttttgtatcaatatggtgttaaagatgctaagggaatcctttcagataagcatgtcatg
ctttcagcaaaatgtcgagctctaggtgaacttcttcctgcactgagaaaagatggacac
agggttctgatttttagccagtggacctcaatgttagacatcttagaatggacattggat
gtaattggattaaaatatagaagacttgatgggagtacacaggtgacagacagacaaacc
atagttgatgatttcaacaatgacacttctatatttgcgtgcttgctgtccactagagct
ggaggacagggtttgaacttgactggagctgatactgttgttatccatgatatggatttc
aacccacagattgatcggcaggcagaagatcgatgtcatcggattggccaaacaaaacct
gtcacaatatacaggttagtgactaaaggtacagttgatgagaatgtttatgagatagca
aaacgaaagcttattttggatgctgctgttcttgagacgggggtggaggtggataatgag
ggcgacacatctgaaaagacaatgggacagatactatcatcacttttgatgggctaa
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