Manihot esculenta (cassava): 110601602
Help
Entry
110601602 CDS
T05761
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110601602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110601602
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
110601602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS_3
PAS
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
110601602
NCBI-ProteinID:
XP_021594488
LinkDB
All DBs
Position
15:complement(10914810..10917857)
Genome browser
AA seq
626 aa
AA seq
DB search
MSNHEKEEDDDEFQGSGKRLKCTKAEEEDDDDEEELEEEGQSEIPLDAGFFFYPTTPTSI
VVSDALEPDFPIIYVNKVFEIFTGYRADEALGRNCRFLQYRDPRARRRHPLVDPVVVSEV
RRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQVFSEAKIDLNRVS
YPVFKETCNQQCDQAAKFSHLSGQSPFNHHQEICGILQLSDEVLAHNILSRLTPRDVASI
GSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKL
TVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAANPEWERVSVKSSPP
GRWGHTLSCVNGSWLVVFGGCGREGLLNDVFVLDLDAKQPTWKEVSGGTPPLPRSWHSSC
TVEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPTWREIPTSWAPPSRLGHSLSVYGRTKI
LMFGGLAKSGHLRLRSGEAYTIDLEDEEPQWRQLDCNAFTGVGSQSSVVPPPRLDHVAVT
MPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRV
LVLGGHTGEEWVLNELHELCLASRQD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccatgaaaaagaagaggatgatgatgagtttcagggatctggcaaaaggcta
aaatgcaccaaagcagaagaagaagacgatgatgatgaagaggaattggaagaagaaggg
caaagcgagattccgttggatgcaggtttcttcttctacccaactactccaacatctatt
gtcgtttctgatgctctcgagcccgattttcccatcatttatgtcaacaaagttttcgag
atcttcactggctaccgcgctgatgaggccctcggtcgaaactgtcggttcttacaatat
agggatcctcgtgcgcgaagacgacatccgttagtagatcctgttgttgtttctgaagtt
agaagatgtcttgaggaaggcattgaattccaaggtgagcttctcaattttcggaaggac
ggtactccattggtaaacaggttaagacttgcacctatacatgatgatgatgggactgtc
acacatgtcattggtattcaagtgttttcagaagcaaaaatagatctgaaccgtgtttct
tatcctgttttcaaagagacttgcaatcaacaatgtgatcaagcagcaaaattttctcat
ttgagtggacaatcaccatttaatcatcatcaagaaatttgtggaatccttcaattatct
gatgaagtattggctcacaacattttatcacgcttgacaccaagggatgttgcatccatt
gggtctgtatgcagaaggattcgtcagttgacaaaaaatgagcatgtgaggaagatggta
tgccaaaatgcatggggaagagaagtcactggtgcactggagctgatgactaagaagtta
ggttggggacgcctggctagggaattgaccactctcgaggctgtgtgctggaggaaactg
acagttggaggagcagttgagccttctcgttgtaatttcagtgcctgtgcagcagggaat
agactcgttttgtttggaggggagggagttgacatgcagccaatggatgatacatttgtt
cttaatcttgatgctgcaaatcctgagtgggagcgggtgagtgttaaatcatctccacct
gggcgctggggccacactctctcctgtgttaatggttcatggttggtggtatttggcgga
tgtggaagggaagggttgctcaatgacgtttttgttctggacttggatgccaaacagcca
acatggaaggaagtttctggtggaactcctcctcttcctcgatcttggcatagctcttgc
acagtagaaggttctaaactggttgtctcaggtggatgcacagatgcaggggtacttctg
agtgacacttacctattggatctcactacagacaagccaacatggagagagattccaact
tcctgggctcctccatctcgattaggccattcactctcagtttatggtcggacgaaaatt
cttatgtttggtggtcttgccaagagtgggcacttgcgactaagatcaggtgaggcatac
actattgatttggaggatgaagaaccacagtggcggcaactagattgtaatgcattcacc
ggcgtaggcagccaaagttctgttgttcctcctccaagacttgatcatgttgctgtcacc
atgccatgcgggaggattataatttttggtggttcaattgctgggctgcattctccttct
cagcttttcctgttggatccctctgaggagaaaccatcatggaggattctcaatgttcct
ggccagccacctaaatttgcctggggccacagtacatgcgtggttggagggacaagagtt
ctggtattgggtgggcacactggggaggaatgggtactaaatgagttgcatgaattgtgc
ttagccagcaggcaagactga
DBGET
integrated database retrieval system