Manihot esculenta (cassava): 110601607
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Entry
110601607 CDS
T05761
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110601607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110601607
Spliceosome [BR:
mesc03041
]
Complex B
Other components
RES complex
110601607
Complex C
110601607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
110601607
NCBI-ProteinID:
XP_021594493
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All DBs
Position
15:15312272..15323448
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AA seq
754 aa
AA seq
DB search
MDKVEARERIDFCFFKTIIKPLDAFMRKAFLSQHSSSLPPLALSASPWYSRAPPAYCSSA
LHAVNVVAASCARCCVRSSWLLLRSPPPLPLVLVAVSTGPVLLPSGAAPRRWSSSSITPP
LVLVLNHSASVPRRVLSHCRKWGKLLILTMAAQASGSKSLKEYLKRYETNTEEEQKKKRK
KKKVKPDGPGVLVLDEDPVWQKPVKLEEEEENDSADEKPQVDEDIEVKRMRRLEQLRSRR
PYNTIAEDGSGWVSLTSKANATEQNSDMSPPRRKRYNTPSPEPLDRPSDAGRAGADFSPP
RRQTHHHSPLPEPHTRSQHFTDLNSDLSPSRKHRARNDTPSPDPSLKPHLRESDLSPVRR
RKHHYSPSPGPDTKLKYSGIAHADLSPPRRQRETNYTSSLPAGRKEDDDFSPPRQQRRRH
YTPSPEPLQNSDMSPPRRSHARTSERRKSEVPESRVSHPRRADHRSSHGDARTSLGSDLS
PPRKRRMSVEKSGSPDFSYQHLSRHSSTPVNGGSHAPLDQDVSLRRKNQESSDPVSSKGR
AKTGLITGHDIMEEISKTKKDDLLRFEQMDPSLSGRGAEPVFRDKKGQRISKEEYMKSKQ
KVEEKPKEKKLEWGKGLAQKREAETRLLELEQEKDKPFARTRDDPELDKMMKERVRWGDP
MAHLVKKKHSGPVLADLGDSEKMKESGFIVPQEIPSHSWIKRGLDAAPNRYGIKPGRHWD
GVDRSNGFEKKMFQRLNEKRATEREAYLWSVSDM
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggataaagttgaggcgagggaaagaattgacttttgttttttcaagaccataatcaaa
cccttggatgcttttatgagaaaagcatttctctctcaacacagctcgtccctcccaccc
ttggccctctccgcctctccttggtacagccgcgcgcctcccgcctattgttcctctgct
cttcacgctgtcaacgtcgttgctgcgtcttgtgctcgttgctgtgtccgctcgtcctgg
ttgctacttcgctctcctccgccgcttcctctagtcctcgttgctgtgtccactggtcca
gtccttctgccgtccggtgctgctcctcgccgctggtcctcgtcctcaatcactccgccg
ctggtcctcgtcctcaatcactccgcctctgttcctcgccgcgtcctcagtcactgcagg
aagtgggggaagcttttgattctaactatggcggctcaagcttcaggatctaagtccttg
aaagagtatttgaaacgctatgaaactaacactgaagaagagcagaagaagaaaaggaag
aagaagaaagttaaacctgatggaccaggtgttttggttctggatgaagatcctgtctgg
cagaagccagtaaaacttgaggaagaagaagaaaatgattctgctgatgaaaaacctcag
gttgatgaagacatagaagttaagcggatgaggaggctggagcaacttagatccaggcgc
ccttataatacaattgctgaggatggaagtggatgggtttcactcacttctaaagccaat
gccactgaacaaaattctgatatgtctccaccccgtagaaagaggtacaacacaccctca
cctgagcctttagataggccatcggatgctggtagagcaggagcagatttctcacctcca
cggcggcagacccaccaccattctccattgcctgaacctcatacaaggtctcaacacttt
actgacctgaattctgatttgtccccttctcggaagcatagagctcgaaatgatactcct
tcaccagacccatccttgaagccgcacttgagagaatctgacttgtcacctgtgcggcgg
cgaaagcatcattattccccttctcctggacctgatacaaaactcaagtattctggcatt
gcacatgctgatttatcaccacccagaaggcaaagagaaacgaactacacatcttcacta
cctgctggaaggaaagaagatgatgatttttctcctccacgacaacagcgtaggcgtcat
tatactccatctcctgaacctcttcaaaattctgatatgtctcctcctcgccgatctcat
gctcggacttctgaaaggaggaaatctgaagtgcccgagtcaagagtatctcatccaagg
cgagctgatcataggtcttctcatggtgatgcacgtacttccctggggtcagatctttca
cccccaaggaaaagaagaatgagtgttgagaaatcaggatcaccagatttttcttatcag
catttgtctaggcattcaagcacgcctgtgaatggtggttcacatgcacctctggaccaa
gacgtttcactaagaaggaaaaaccaggagtcatctgatcctgtttcctcaaaggggcgg
gcaaaaactggtttgattactggccatgatattatggaagagatatctaaaactaagaag
gatgatttattgaggtttgaacagatggatccttctttgagcggtcggggtgctgaacct
gtatttcgtgataagaaaggccaaagaatatcaaaggaggagtatatgaaatcaaaacaa
aaagttgaggaaaagcctaaggagaagaagttagagtggggtaagggattggctcaaaag
cgggaagctgagacaaggctgttggaattagaacaggagaaggacaaaccatttgcaaga
accagagatgatcctgaactcgacaaaatgatgaaggagagagtaagatggggtgatcct
atggcacatttggtgaagaaaaagcattctggacctgttcttgcggatctaggagatagt
gagaagatgaaggaatcagggtttatagttcctcaggagattcccagtcatagctggata
aaaagaggattagatgctgcaccgaatcgatatggtataaagccaggaagacactgggat
ggggttgatcgaagtaatggatttgagaaaaaaatgttccaaaggctaaatgaaaaacga
gctacagaaagggaagcttatctgtggtctgtctcagatatgtga
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