Manihot esculenta (cassava): 110601635
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Entry
110601635 CDS
T05761
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00450
Selenocompound metabolism
mesc00970
Aminoacyl-tRNA biosynthesis
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
110601635
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110601635
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110601635
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110601635
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
110601635
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110601635
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110601635
Prokaryotic type
Other AARSs
110601635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
C1_1
CoV_peptidase
tRNA-synt_1e
DUF3952
Motif
Other DBs
NCBI-GeneID:
110601635
NCBI-ProteinID:
XP_021594539
LinkDB
All DBs
Position
15:complement(4240016..4247123)
Genome browser
AA seq
806 aa
AA seq
DB search
MGDLSSTNSSGDGRTAPKVPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCR
LRGYNAIYICGTDEYGTATETKALEENCTPKEICDKYHAIHREVYKWFNISFDEFGRTSS
PQQTEVCQAIFKKLLENNWLSENAMQQLYCDTCKRFLADRLVEGNCPTEGCNYDSARGDQ
CEKCGKLLNPTELKDPRCKVCRNTPHIRETNHLFLELPLLRDKLGKYIESMSIAGSWSQN
AIQATNAWLKEGLKPRCITRDLKWGVPVPHEKFMDKVFYVWFDAPIGYVSITACYTPDWE
KWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKS
KGIGVFGNDVKDTKIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKLNSELLNNLGNFINRV
LAFISKPPGAGYGSIIPDAPNADSHPLTKKLAEEVHKYVEQYVEAMEKVKLKQGLKTAMS
ISSEGNAYLQESQFWKLYKEDQSSCNIVMRTAVGLVYLLACLLEPFMPSFSLEVFKQLNL
PPEKASLCDEKGDIDRAKKPWEYLSTNHKIGTPEPLFKELKDEEVDFFRQKFAGSQAERA
EAEAAKIAEQLKKTKVSDVSGKKQQTKKPSAEAKPKGTVEPEISITRLDIRVGLIKKAQK
HPDADSLYVEEIDVGGGETRTVVSGLVKYIPLEEMQNRKVCVLCNLKPATMRGIKSQAMV
LAASNSDHTKVELVDPPESAAVGERVTFPGFEGQPDDVLNPKKKVWETLQVDLHSNTDLV
ACYKDIPFTTSAGVCKVASIQSGSIR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatctctcatccacaaatagctccggtgatggtcggacagccccgaaggtcccg
atccctggcaagagaaacatacttatcactagtgccttgccttatgtcaataacgttcct
caccttggcaatataatcggatgtgttttgagcgctgacgtttttgctcgatattgccgg
cttcgaggctacaatgccatatacatatgcggaactgatgagtatggaacggcaacagag
accaaggccttggaggagaattgcaccccaaaagagatttgcgacaagtaccatgcaatt
catagggaagtttataaatggtttaatataagttttgatgaatttggacggacatcatct
ccacagcaaactgaagtttgccaagcaatttttaagaagttgttagagaacaattggctt
tctgagaacgcaatgcaacagctatactgtgatacttgcaaaaggttcttggctgatcgg
cttgtagagggtaattgtcctactgaaggttgtaattatgattctgcacgaggtgatcaa
tgtgaaaagtgtggaaagctgttgaatccaacagagttaaaagatcctaggtgcaaggtt
tgtcgaaacactccacacattcgtgagacaaatcacttgtttcttgagcttcctctgcta
agggataaactgggaaaatatattgagagcatgtcaatagctggatcttggagccagaat
gctattcaagcaacaaatgcatggttgaaagaagggttgaagccacgatgtattactaga
gatttgaagtggggggtcccagtgccgcatgagaaatttatggataaggttttctatgtc
tggtttgatgcccctattggatatgtctcaatcactgcatgctatacacctgactgggag
aaatggtggaagaatcctgaaaatgtggagctttatcagtttatgggaaaggataatgtg
ccattccacactgtgatgtttccctctacacttctgggaactggtgaaaattggaccttg
atgaagaccataagtgttactgaatacttaaactacgaggcaggaaagttttccaagagt
aaaggcataggagtttttggtaatgatgtaaaggatacaaaaattcctgtagaagtgtgg
agatattatttattgactaacaggccagaggtatctgacactttatttacatggtccgac
ttgcaagcaaaacttaacagtgagttgctcaataatttgggcaacttcatcaatcgagta
ttagcttttatttctaagcctccaggagcaggatatggttccattattccagatgctcca
aatgcagattcacatcccctgacaaagaaattggctgaagaagttcataaatatgtggag
caatatgttgaagctatggagaaggtcaaattaaagcagggactgaaaactgcaatgagc
atttctagtgaagggaatgcatatttgcaagaaagtcaattctggaagctttacaaggaa
gaccaatcttcatgtaatattgttatgaggactgctgttggacttgtataccttcttgca
tgtttgctagaaccttttatgccatccttctctcttgaggtcttcaagcagcttaatttg
ccacctgaaaaggcttcactttgtgatgaaaaaggagatattgacagggcaaagaaacct
tgggaatatctatctaccaaccataaaattgggacaccagagccattgttcaaggaactg
aaagatgaagaagtggatttcttcaggcagaaatttgctggaagtcaggctgagagggca
gaagctgaagcagcaaaaattgctgagcagctgaagaagacgaaagtttcagatgttagt
gggaagaagcaacagaccaaaaagccttctgcagaggcaaaaccaaagggcactgttgag
ccagaaatctccatcacaagacttgatattcgtgttggcttaattaagaaagctcagaag
catcctgatgctgattcattatatgtggaagaaattgatgtggggggaggagagactaga
acagttgttagcggacttgtcaagtatatacctctagaagagatgcagaaccggaaggtc
tgcgttctttgtaacttaaagccagcaaccatgaggggtatcaagtcacaagctatggtt
cttgctgcttccaacagcgaccacaccaaggttgagttggttgatccacccgaatccgct
gctgtgggagagagagttacatttcctggatttgaaggtcagcctgatgatgtcctaaac
cctaaaaagaaggtctgggagacgctgcaagtggatctccattccaacacagatctagta
gcctgctataaagatattccatttaccacgtcagctggtgtgtgcaaggttgcatccatc
caaagtggatcaataaggtaa
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