Manihot esculenta (cassava): 110601686
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Entry
110601686 CDS
T05761
Name
(RefSeq) phytochrome E
KO
K12123
phytochrome E
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
110601686
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_3
X
Motif
Other DBs
NCBI-GeneID:
110601686
NCBI-ProteinID:
XP_021594608
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Position
15:complement(9365107..9370626)
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AA seq
1127 aa
AA seq
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MGLQGGREGGATALSSSAASSMRPFATTSKSNATIAQYNADAALLAEFEQSGVSGKSFNY
SRSVLSAPDTVPEGQITTYLSRIQRGGLIQSFGCMIAIEEPTFRIISSSENCFQLLGLSS
HNELESNQVKSLIGIDARSLFTPQSGVSLTKAAASREISMLNPIWVHSRTNQKPFYAILH
RIDVGIVIDLEPARSSDPVLSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQT
LTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICD
CHASPVRIIQSEELKHPLCLVNSTLRSPLGCHTQYMANMGSIASLAMAVIINCNDTTKLW
GLVVCHHTSPRYVPFPLRYACELLMQAFGLQLRMELQLAAQLMEKKILRTQTLLCDMLLR
DAPFGIVTQSPSIMDLVKCDGAALCYGGKCWLLGITPTESQVKDIAEWLLTNHGDSTGLS
TDSLAGAGYPGAALLGDAVCGMATARITSRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGE
RMHPRSSFNAFLEVVKSKSLPWEVSEIDAIHSLQLIMRDSFQDMENSGSKALVYAQQEDM
GTQGVGQLSSVACEMVRLIETASVPIFGVDSAGLINGWNAKVAELTGLQTSEAMGKSLVH
EIVHEDSCGVVESILGRALQGEEDKNVELKLRKFGFHQQKPVVYVMANACTSRDYSNNIV
GVCFVGQDITSEKHVMDKFLRLQGDYKTIIESLNPLVPPIFASDENACCCEWNAAMEKLT
GATRQEVIGKMLPGEIFGSLCRLKVQDTLTKFMILLYQGISGQDTEKFPFGFFNRQGKFV
EVFLTISKRTGPNGNVIGSFCFLQIVEPNQQQAFDIHRQEGRANFLKLKELAYIRQEMKN
PLNGIRFTHKLLEDTAVSEHQKQFLETSNACEKQIMAIIEDMDLARLEDGNIELKMEVFL
LGNVLDAIVSQVMILLRERNIQLFLKIPDDIKTLSLYGDQIRLQLILSDILLSVVLHAQS
PDGWVEIKFSPGLKLIQDGNELIRLQIRMTHGGQGLPPALIQDMFEGGNHWTTQEGLGLK
LSRKLLNQMNGHVQYTREHDKCYFLIDLELKLKGRSTVEQADTSRMT
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcagggtggcagagaaggaggcgcaaccgctctgtcatcatcagctgctagc
agtatgagacctttcgccactacaagtaaaagtaatgccaccattgcccagtataatgcc
gatgctgcgcttttagctgagtttgagcaatctggtgtctctggtaagtcatttaactac
tcaagatcagtgctttctgcaccagatactgtccctgaagggcaaataactacttaccta
tccagaatccaaagaggagggctaattcagtcctttggttgcatgattgcaattgaagaa
cccacttttaggatcattagttccagcgaaaattgctttcaattgttgggtctgagttca
cacaatgaactcgagtccaatcaagtaaagagtttgattgggatcgatgcaagatccctt
tttacgcctcaatcgggggtttcattgacaaaagctgctgcttcaagggaaatttcaatg
ttaaacccgatttgggttcattctaggactaaccagaagccgttttatgctatactgcat
aggattgatgtgggaattgtaattgatttggagcctgcaagatctagtgatcctgttctc
tctcttgctggcgccgtacagtcacagaaactcgctgttcgtgcaatttctaggttgcag
tcgctccctggaggtgatattggggtgttgtgtgatactgtcgtagaggatgttcaaaca
cttactggctatgacagggttatggtttataagttccacgatgatgatcatggagaagtg
gtgtcagaaattaggaggtctgatttggaaccttacttgggtttgcactatcctgctaca
gatatcccccaagcagcacgtttcttgttcaagcagaatcgcgtgaggatgatttgtgat
tgccatgccagtccggtgaggatcatccaaagtgaagaattgaagcaccctctttgttta
gtcaattcaactcttcggtcaccccttggctgccacacacagtacatggccaatatgggg
tccattgcttcattagcaatggcagttatcataaattgtaatgatacaaccaagctttgg
ggcctagttgtgtgccatcacacttccccgcggtatgtccctttcccccttcgttatgca
tgtgagttactcatgcaggcttttgggctacaactccgtatggagcttcagttggcagca
cagttgatggaaaagaagatcctcaggactcagacgttgctctgtgacatgcttctccga
gatgccccttttggtattgtcactcaatcccctagtattatggatcttgtgaaatgtgat
ggagctgcattatgctatggaggaaaatgttggttgctgggcataactccaactgaatca
caggtaaaagacattgcagagtggttgctcactaatcatggagattctaccgggttgagt
actgatagtttggctggtgctggttatcctggtgctgcattactcggtgatgctgtttgt
ggcatggctactgctagaatcacttcaagagattttttgttctggtttaggtctcacact
gccaaggaagtcaaatggggaggagccaagcatcatccagaagataaagacgatggtgaa
agaatgcacccaagatcatcctttaatgctttcctggaggttgtgaagagcaaaagtttg
ccttgggaagtttcagaaattgatgctattcattctttacagctaataatgagagactcg
tttcaggatatggagaacagtggttccaaggcattggtctatgctcagcaagaggacatg
gggacacagggtgtaggtcaattaagttcagtggcatgtgaaatggttagattgattgag
acagcctcggttccaatttttggggttgattcagcaggtcttatcaatggatggaatgcc
aaagttgcagagttgactggattacaaacaagtgaagcaatggggaagtctctggttcat
gaaattgttcacgaggactcttgcggagttgttgaaagtattttgggcagagctttgcaa
ggtgaggaggacaaaaatgttgagttaaaactgaggaaatttgggtttcatcagcaaaag
ccagttgtatatgttatggccaatgcctgcacaagtagggactactcaaacaacattgta
ggggtatgctttgtgggccaagacatcacatctgaaaaacatgttatggataaatttctc
cgactacaaggagattacaagactatcatagaaagccttaatccactggtaccaccaata
tttgcttcagatgagaatgcctgctgttgtgaatggaatgctgctatggaaaagctgaca
ggtgcaacaagacaggaggtgataggcaaaatgcttcctggagagatctttgggagtctt
tgtcggctaaaagttcaagatactttaactaagtttatgattctgttgtatcaaggaatt
agtggtcaagatactgagaagtttccattcgggtttttcaatagacaagggaaatttgtg
gaggtgttcttaacaataagcaaaaggactggaccaaatgggaatgtaattggctctttc
tgcttcttgcagattgtcgagcctaaccagcagcaggcctttgatatacatagacaagag
ggccgagcaaactttctgaaactgaaagagttggcttacatacgacaagaaatgaaaaat
cctttgaatggtattcggtttacccacaaacttctcgaggatacagcagtatcagaacat
cagaagcaattccttgaaacaagcaatgcatgtgaaaaacagattatggccataattgag
gatatggatttagcaaggctagaggatggcaacattgagctcaagatggaagtatttctt
ttgggaaatgttttagatgccattgttagtcaagtcatgattttgctgagagaaaggaat
atacagctttttctcaagatcccagatgatatcaaaacactgtcattgtacggtgatcaa
attaggcttcagctgatcttgtcagacatcttgcttagtgttgttctacatgcacaatct
ccggatggctgggtagaaatcaagttttcacctggtctgaagctgatacaagatggaaat
gagcttatccgtttgcagatcagaatgacacatgggggtcagggccttccacctgctctc
atccaagatatgtttgagggaggaaatcactggactacacaagaaggcctaggactgaaa
ctgtctcgaaaactgcttaatcagatgaatggtcatgtccagtatacaagggagcatgat
aaatgttacttcctcattgatcttgaactgaaattgaaaggaagatcaacggtggagcaa
gcagacacaagtagaatgacctga
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