Manihot esculenta (cassava): 110601767
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Entry
110601767 CDS
T05761
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00240
Pyrimidine metabolism
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
110601767
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
110601767
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
110601767
NCBI-ProteinID:
XP_021594748
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Position
15:8981479..8990739
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AA seq
370 aa
AA seq
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MSSSALSRLSNIHGHLHPSDSNSMIGEGLVKVSPEVSEALSCGHAVVALESTIISHGMPY
PQNLETAKEVEAIVRKNGAVPATVAILDGKPCIGLSMEELERLATLGTRAQKTARRDIAH
VVASRGNGATTVSATMYFASMVGISVFVTGGIGGVHRHGEQTMDISSDLTELGRTPVAVI
SAGVKSILDIPRTLEYLETQGVCVATYKTNEFPAFFTEKSGCKVTCRVDTPEDCARLIDA
NMKLKLGTGILIAVPIPKEHSASGNMIESAIQSALREARDKNITGNAETPFLLARVNEIT
GGASLASNIALVKNNSLVGAKIAVALAQLREREHSNRGKNHEREDVLSIKNCFHSEGTCL
HKMIASLANN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcagctctatcacgattatccaatatccatggacatcttcacccttcagac
tcaaactccatgattggagaaggattggtgaaggtctctccagaggtttctgaagctttg
tcgtgtgggcatgctgttgttgccttggaatccactattatttcccatgggatgccatat
cctcaaaatttggagacagcaaaggaggttgaagcaattgtgaggaagaatggagctgtt
cctgctacagttgcaattttagatggcaaaccatgcataggtttaagcatggaagagttg
gagagacttgctactctgggaactagagcacaaaaaactgctcggagggatattgctcat
gtggtggcctccagaggaaatggtgcaactactgtttctgcaaccatgtattttgcttct
atggttggtatctcggtgtttgttactggtggaattggaggagtacatagacatggcgaa
caaacaatggatatatcctctgatctcactgagcttggcaggactccagtcgctgttatc
tctgccggagtgaaatctatattagatattccaagaacccttgaatatttggaaactcaa
ggagtttgtgttgctacttataagacaaatgaatttcctgcttttttcacagaaaaaagt
ggctgtaaggtaacttgtcgtgtagacaccccagaggactgtgctcggttgatagatgct
aatatgaaacttaagcttgggactggaattttgattgctgttccgatcccaaaagagcac
tcagcttctggaaacatgatcgagtctgccatacaaagtgcccttagagaagccagggac
aagaatataacaggaaatgctgaaacccccttcttgcttgcaagagtgaatgaaataact
ggaggtgcctcactggcgtcaaatattgcacttgtaaaaaataattctcttgttggcgca
aagattgcagtagccctggctcagctcagggaacgtgaacattctaatagaggcaaaaat
cacgaaagggaagacgttttgagcattaagaattgttttcatagtgaaggcacgtgtcta
cacaagatgatagcttctttggcaaacaactga
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