Manihot esculenta (cassava): 110601770
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Entry
110601770 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110601770 isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110601770
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
110601770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
110601770
NCBI-ProteinID:
XP_021594760
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Position
15:complement(11774449..11783011)
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AA seq
501 aa
AA seq
DB search
MVSDSDLVTRLREILRTSDLDTATAGSVRRKLEEDLGVDLSDRKKFIREQIDIYLETLQN
EHKDEDEEENMPVDVNQNEEGNEIDAVEEEGEEEEEEEEEEEESEERGTKRKRSNKVEKV
GKKRGGGFTKLCALSPRLQKFVGVPELARTEVVKKLWAYIRENNLQDPKNKRNINCDEAL
RDLFRVNTINMFQMNKALSKHIRPLTAEAGCLYFLQFQLQLPQTGFHIELPLYFIYEHEK
LKEKGEDGSNSVSESDDPAEEQEVEEEEEEAVEKEGTVQSNKGGGSSKADKDVKKRGGGF
TKLCSLSPQLQAFTGVPELARTEVVKKLWAYIREKDLQDPNNKRNIICDESLRALFRVDS
INMFQMNKELSKHIGPLNEEDGTSPDNSIQKETRCKQGREEGSDELKQKEKRQKKGASGL
LVPLPLSDALVKFFGTGESTLSRADVVKRMWEYIKQHDLQDPSDKRRIICDEKLKELFEV
DSFNGFSVSKLLTSHFIKMEQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggattctgacctcgtgacccgccttagagaaatcctccggacctctgacctc
gacaccgccaccgctggcagtgtccgtaggaagttggaggaggatttaggcgtcgattta
tcggaccggaaaaagtttattcgggaacaaatcgacatttacctcgaaaccctacagaat
gagcataaggatgaagacgaagaagaaaatatgccagtggatgtgaatcagaatgaggaa
ggcaatgaaatcgacgccgttgaagaagaaggagaagaggaggaagaggaggaggaggaa
gaagaggagagtgaggaacggggaactaaaagaaaaaggtcaaataaggttgaaaaagta
ggcaagaaaagaggaggtggctttacgaagctatgtgccctatctccacggcttcaaaag
tttgttggagtgcctgaattagcaagaactgaggttgtgaagaaactttgggcatatatc
agggagaacaacttgcaggatccaaagaataagcgaaatataaattgtgatgaagcattg
cgggatctttttcgtgtaaatacaattaatatgtttcaaatgaataaagccttgtccaag
catattcggccattaaccgcagaagctggatgtttatattttctgcaatttcaacttcaa
ctaccacaaacaggcttccacattgaacttccgctttatttcatttacgagcatgaaaag
ctgaaggaaaaaggtgaagatggtagtaattctgtgtcagaaagcgatgatccagctgaa
gaacaggaagttgaagaggaggaagaggaagctgtggagaaagagggtactgtacaaagc
aataaaggaggtgggtcttctaaggcggataaagatgttaagaaaagaggaggaggcttt
actaaattgtgtagcctttctccacaacttcaagcattcactggagtgcctgaattggcc
aggacagaggttgtgaagaaactttgggcctatattcgggagaaagacttacaagatcca
aataacaaacggaatataatatgtgatgaatcacttcgtgctctctttcgtgttgattct
atcaatatgtttcaaatgaacaaagaattgtccaagcacatagggccattaaatgaggaa
gatggtacatctccagacaactctatacagaaggaaacacggtgcaagcaaggaagagaa
gaaggttcagatgaactaaagcagaaggaaaaacggcagaagaagggagcttctggtctt
cttgttccccttcctctttcagatgctcttgtaaaattttttggcactggcgaaagtaca
ttatctcgggctgatgttgtaaagagaatgtgggaatacataaaacaacatgatctgcag
gatccatctgataagaggagaatcatttgcgatgaaaagttaaaagaactatttgaggtc
gactcattcaatggattctcagtctcaaagctcctgacatctcatttcatcaagatggaa
cagtga
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