Manihot esculenta (cassava): 110601795
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Entry
110601795 CDS
T05761
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110601795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110601795
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110601795
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
110601795
Messenger RNA biogenesis [BR:
mesc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
110601795
Transfer RNA biogenesis [BR:
mesc03016
]
Prokaryotic type
tRNA degradation factors
110601795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
Urease_gamma
S1_RRP5
KH_PNO1_2nd
KH-I_KHDC4-BBP
DUF3626
Motif
Other DBs
NCBI-GeneID:
110601795
NCBI-ProteinID:
XP_021594802
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All DBs
Position
15:complement(14148444..14162919)
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AA seq
958 aa
AA seq
DB search
MSSLASRANPLLSSLPHFLTWRALGFRTICSGRLGFASSDPDPPVAGTKVLETFKEEFEI
GSRLITLETGKIARFANGSVVLGMEETKVLSTVTSAKGDSVRDFLPLTVDYQEKQFAQGV
IPNTFMRREGAPKERELLCGRIIDRPIRPLFPAGFYHEVQVMASVLCSEGKQDPDVMAAN
ATSAALMLSDIPWGGPIGVVRMGRICGQFIVNPTMDELNLSDLNLVYACTKDKTLMIDVQ
AREITEKDLEAGLRLAHPEAVKFLEPQIRLAARAGKNKKDYKLSMVSEKTLEKVRNLAET
QIEAVFTDSSYGKFERGEALDNITQDVRRKLEEECDEESLNVLPKVIDTVRKQVVRRRII
SEGFRVDGRHLDEVRPLHCEAGNLPILHGSSLFSRGDTQVLCTVTLGAPGDAQRLESLVG
PPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRVNSE
VMASDGSTSMATVCGGSIALMDAGIPLQEHVAGVSVGLVSEVDPSTGAIKDYRIVTDILG
LEDHLGDMDFKIAGTRNGITAIQLDIKPAGIPLDIICESLEHARKGRLQILDHMEQEISA
PRTEDDRNRPRIATMKFSNDVLRQLIGPLGAVKRKVEEETGARLSISDGTLTIVAKNQSV
MEKAQDKIDFIIGREIEIGGVYKGIVTSIKEYGAFVEFNGGQQGLLHISELSHEPVSKVS
DVVCVGQQLSLTCIGQDVRGNIKLSLKATLPNPGQSEAKNVVEGSVPAMSKTPKVWASVE
SVSNELDELKPVAELLVNRGVVNSPSSSPAFLIRSVAECDEQEKSTGLNEASKITSKTSR
TSKSNRKSKTNPPKNDDSHSSFSSSDIFSHTEDSSNNDEDEGKTPVTARNLKLGTKVTAK
VYQIRTHGLVLDLGGGVRAMYRFEANGKRDFELGDELRVKCTSFSSKGVPVMSLVDAY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgttagcaagcagagccaatcctctcctcagttctcttcctcatttcctcaca
tggcgcgcgctcggcttccgtaccatctgcagtggccgcctcggcttcgcatcctccgac
ccggacccaccagtagctggaaccaaagtcctcgagactttcaaagaagagttcgagata
ggatcacgccttattacacttgaaactggaaaaatcgctcgatttgctaacggctctgtc
gttttaggcatggaagaaactaaagttctatccacagtcacttctgctaaaggcgactct
gttcgagactttttacctctcactgttgattaccaagagaaacaatttgcccaaggtgta
attcctaatacattcatgcgaagggaaggtgctccaaaagaacgtgagcttttatgtggt
cgtatcattgaccgacctattcgaccactcttcccagctggattttaccatgaagtgcag
gtaatggcaagtgttctttgttcagaagggaaacaagatccagatgtaatggcagctaat
gcaacgtctgctgctcttatgttgtcagatattccctggggtggacccattggagtggta
cgcatgggaaggatttgtggacagtttattgttaatcccaccatggatgagctcaacttg
agcgatctgaatttggtatatgcctgtacaaaggacaaaacattaatgatagatgtgcaa
gccagggagataacagagaaagatctggaagcaggattaagactggcacatccagaggct
gttaagtttcttgaacctcaaatcagacttgctgcaagagctggtaagaataagaaggat
tataaactgtctatggtctctgagaaaacattagaaaaagttagaaacttggcagaaaca
caaattgaagctgtttttaccgattcctcatatggcaagtttgaacgtggagaggcttta
gataacattacacaagatgtaagaagaaaacttgaagaagaatgtgatgaagaaagctta
aatgtccttccaaaggtgatagacacagtgaggaaacaggttgttcgcaggaggattatt
tcagaaggatttagagttgatgggagacatcttgatgaagtcaggcctttgcattgtgag
gccggtaatttacctatattgcatggatcatcacttttttctcgtggagatactcaggtt
ctctgtaccgtgacacttggagcacctggagatgctcaacgcttggaatccttggttgga
ccaccaacaaagcgcttcatgctgcactatagttttccaccattttcaattaatgaagtt
ggcaaacgagttggtttgaacaggcgtgaagtcgggcatggaacccttgcggagaaggct
ctgcttgctgttttgcctcctgaagatgattttccatatactgttcgtgtcaattctgaa
gtcatggcatctgatggttcaacatcaatggcaactgtttgtggaggtagtattgctttg
atggatgctggcattccattacaagaacatgtagctggtgtttctgtgggtcttgttagc
gaagttgatccatcaactggtgcaatcaaggactaccgaatagtgactgatattttgggc
cttgaagatcatttgggggacatggatttcaaaatagctggaacacgtaatggaattact
gcgattcagttagatataaaacctgctggaattcctttagatatcatttgtgagagttta
gagcatgcacgtaaaggccgccttcaaatccttgatcacatggaacaagagatcagtgca
ccacgtactgaagatgacaggaaccgtcctcgaatagctacaatgaagttcagcaatgat
gttcttcgtcagctaattggtcctcttggtgctgttaagagaaaagttgaagaggaaaca
ggagctcgattgtccattagtgatggtacacttactattgttgccaagaatcagagtgta
atggagaaggctcaagacaagattgatttcataattggccgtgaaattgaaattggtgga
gtttataagggtattgtaacttcaataaaagaatatggtgcctttgttgagttcaatggt
ggccagcaaggtttgctacatatttctgagttgtcacatgaaccggtctctaaggtttca
gatgtagtatgtgtgggtcagcagctctctttgacgtgcatagggcaggatgttcgtggt
aacattaaattgtcccttaaagcaactttacctaacccggggcaatccgaggcaaaaaat
gtggttgaaggatctgttcctgccatgagcaagacgcctaaggtttgggcctcagttgag
agtgtgtctaatgaactagatgaactcaaacctgtggctgagttgctggtgaatagaggt
gtggtcaattctccgtcatcatcaccagcatttctaatacgtagcgttgcagagtgtgat
gaacaggaaaaatctaccggtctgaatgaggcttccaaaataacatctaaaacctcccgc
acttcaaaaagtaataggaagtcaaaaacaaatccacccaaaaatgatgactctcattca
tcattttctagttctgatatcttttcacatactgaggatagttcgaataatgatgaggat
gaaggtaagactcccgtgactgcgagaaatttgaaacttgggacaaaggttactgccaaa
gtctaccaaattcgtacacatgggctggtacttgatttgggtggtggagttcgtgctatg
tatcggtttgaggcaaatggcaagagggactttgagttgggtgatgagctacgagtgaag
tgtacaagcttttccagcaagggggtcccagtaatgtccttggtggacgcatactaa
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