Manihot esculenta (cassava): 110601800
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Entry
110601800 CDS
T05761
Name
(RefSeq) YTH domain-containing protein ECT3 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110601800
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110601800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
Motif
Other DBs
NCBI-GeneID:
110601800
NCBI-ProteinID:
XP_021594807
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Position
15:149875..154377
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AA seq
671 aa
AA seq
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MYNEGAPEFFMDQGLYYPTATNYGYYCTGFESPGEWEDHHRIFGADGPEIQYAGAQSESL
PYVYYTPSYGYAQSPYNPYNPYIPGAMIGVDGPYVGAQQYYAMPPYQDPVSSPGYVPVVV
QPDFIPNNSTDPLLDAAGVAFTNRPDGRSSKHGLASSSAAFPKYQSKPTSNQTNTLSKIS
EGSRANVGSSKMSLTHGSISAGSFPTPASSHMLQGRGASGSIQPVDNFSSGKVLPHSNQL
KVAVPINNGFSDFGSSAPGRAGVDKVRSKIHVGRTLNDVNGGPDSLGEQNRGPRTNKSKN
QLAVKAYTTKVGDDEQGNIIIYTDQYNKDDFPVDYGDAKFFVIKSYSEDDVHKSIKYNVW
SSTPNGNKKLQSAYDDAQKIAAGDAKACPIFLFFSVNASGQFCGVAEMIGPVDFAKDMDF
WQQDKWSGSFPVKWHIIKDVPNSSFRHIILENNENKPVTNSRDTQEIMYKQGLEMLKIFK
IHTSKTSILDDFMYYENRQRIMQEEKARLIFKRFETPFLVPALEPAHKLDCLVELPPNKD
EKTMEQKGTNCIKKSEDPLTDQVTSNFDVAHVNNESKISEQAIAKSGGDVASFLKIGSLS
INPKQAEPKPFPDAAPYGSSSDSVDVVTVGSMPVKVNGFAESSGFLRVGSIPLDPRALQR
ERGGAFAKYQS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgaaggagcccctgagttttttatggatcagggcttgtattatcctactgcc
accaattatggatattactgtacaggttttgaatcacccggtgaatgggaggaccaccat
aggatttttggtgcagatggtccggaaatccagtatgcgggtgcacaatctgaaagttta
ccttatgtatattatacccctagctatggatatgcacagtctccttataacccttacaat
ccttacatacctggtgctatgataggcgttgatggcccatatgtaggagcacaacagtat
tatgccatgcccccttatcaggaccctgtatcttcacctggttatgtccctgttgttgtt
caaccagatttcatcccaaacaattcgacagaccccttgctagatgcagcaggtgtagca
tttacaaatagacctgatggaagaagttcaaagcatggtcttgcttcatcatctgcagcc
tttcccaaataccaatcaaaacctacttcaaatcagactaataccttgtccaagatatca
gaagggtcaagagctaatgtaggatcgagcaagatgagtctgacacatggaagtatttct
gctggtagttttcctactccagcttcatcacacatgcttcagggtagaggtgcctctgga
tcaattcaacccgttgataacttttccagtgggaaagttctaccacattctaaccaatta
aaagttgctgttcctatcaataatggcttttctgattttggttcaagtgcacctggacgg
gctggagtggataaggttcgatctaagattcatgttggtagaactcttaatgacgtaaat
ggaggtccagattctttgggcgagcagaatcgtgggcctagaacaaacaaatcaaagaat
caactggctgttaaagcttacacaacaaaagttggagatgatgaacaaggaaacattata
atatacactgaccagtataacaaggatgattttccagtcgactatggtgatgcaaaattt
tttgtaataaaatcttacagtgaggatgatgtccacaagagcattaagtataatgtttgg
tcatccacacccaatgggaacaagaagctgcagagcgcgtatgatgatgctcaaaaaata
gctgctggagatgctaaagcctgccctattttcctgttcttttctgtaaatgcaagtggt
caattttgtggtgttgctgagatgattggcccagttgactttgcaaaggatatggatttt
tggcagcaagataaatggagtggtagctttcctgtcaagtggcatattattaaagatgta
ccaaattccagctttagacacattatattagagaacaatgagaataagccagtgacaaat
agcagagacactcaagagataatgtacaagcaaggtctggagatgctgaaaatattcaaa
atccacacatcaaagacgtcgatacttgatgactttatgtactatgagaaccgtcagaga
attatgcaggaagagaaagccaggcttatatttaaaagatttgaaactccattcttggta
cctgcattagaacctgctcacaagctggattgtcttgtggagttacctccaaataaagat
gagaaaactatggagcagaaaggtactaactgcatcaaaaaatctgaggaccctctcact
gatcaggttacttcaaattttgatgttgctcatgtgaataatgagagtaaaatttctgag
caagcgatagccaaatcaggaggcgatgttgcatcttttttaaagataggttcgctcagt
attaatccaaagcaggctgaaccaaaaccttttccggatgcagccccttatggttctagt
tctgattctgttgatgttgttacggtgggatcaatgcctgtgaaagttaacggatttgct
gaatcatctggttttctaagagttggtagtatcccacttgatcctagggcactacagcgt
gaaagaggtggtgcatttgccaagtatcagtcttag
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