Manihot esculenta (cassava): 110601959
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Entry
110601959 CDS
T05761
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110601959
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110601959
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110601959
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
110601959
NCBI-ProteinID:
XP_043814606
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Position
1:33632384..33639572
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AA seq
623 aa
AA seq
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MRIVTYNVNGLRQRISQFGSLLKLLDSFDADIICFQETKLRRQELTSDLAVADGYESFFS
CTRTNDKGRTGYSGVATFCRVKSAFSSDEVALPVAAEEGFTGLVDSSRNGKAEMPAVAQG
LEEYDQDELLKVDGEGRCIITDHGHFVLFNIYGPRAESDDSERIQFKLMFFKILQKRWES
LRQEGRRIFVVGDLNIAPTAMDRCDAGPDFEKNEFRRWFRSMLVESGGPFFDVFRSKHPD
RREAYTCWPSNTGAEQFNYGSRIDHILFAGSCLHQDYELQGHNFVTCHVKECDILTEYKR
WKPGNTLRWKGGWGIKLEGSDHAPMCTSLVEIPVVPQHGTPSLSARYLPMIHGLQQTLVS
VLLKRQASTQVQSCRMSTSFSEENASIEKCSESMKGSFNRCSIHGLTTSDSYSLNEDSEG
AILRTGKKSKDITNETCPNTTTMLHRSNDSSVPEEKTKKKLRKSQWSQLSLKSFFQKSSN
ISNSSEHSSMDVSLSQADVADSNSHPNETVAKDGQISSAKHYESITDPQDQNEVNQNEVN
YGPSDKEKNNVALQEWKRIQQLMQNSVPLCKGHKEPCVARIVKKPGPTFGRRFYVCARAE
GPASNPEANCGYFKWASSKSRQK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagtgacgtacaacgtcaatggcctgaggcaacgcatctcccagtttggttct
ctcctcaaattgcttgattctttcgatgccgatatcatttgctttcaggaaaccaaattg
agaagacaggagcttacttcggatttagctgtggcagatggctatgagtccttcttttct
tgcactcgcaccaatgacaaaggccgcactggctactccggtgttgctactttttgccgt
gtaaagtccgctttttcgagcgacgaagtggcattgccggttgcagccgaggaaggtttc
actgggcttgtggatagttctagaaatgggaaagccgaaatgccggcagtagcacaaggc
cttgaggagtatgatcaagatgagctcctcaaggttgatggtgagggccgttgtatcatc
accgatcatggtcattttgtgcttttcaatatatatgggcctcgagcagaaagtgacgat
tccgagaggatacagtttaagctcatgttcttcaagatactacagaaaagatgggagagt
cttcggcaggagggaaggaggatatttgttgttggtgatctcaatattgctcccactgcc
atggatcgttgtgatgcaggtccagattttgagaagaatgagttcagaagatggtttaga
tctatgctagttgagtctggaggccctttttttgatgttttcagatcaaaacatcctgac
agaagagaagcgtacacatgctggccatcaaacactggagctgaacaatttaattatggg
agtagaatcgatcacattctttttgctgggtcatgcttgcatcaagactatgagttgcaa
ggtcataactttgttacttgccatgtcaaggagtgcgacatattgacagagtataaacgc
tggaaacccggaaatacgctgaggtggaagggaggatggggaataaaattggaaggttct
gatcatgctccaatgtgtacaagtttggtagaaatccctgtcgttcctcaacatggcacc
ccttctttatctgctagatatctcccgatgattcatggtctccagcagactcttgtgtct
gttctattgaaaagacaagcatctacacaagttcaatcttgcaggatgtcaacttcattc
tcagaggaaaatgcttctatagagaaatgcagtgaaagcatgaaaggatcgttcaacaga
tgcagcatacatgggctaaccacaagtgactcatattctttgaatgaagactctgaaggt
gccattttgagaacaggcaagaaatccaaggatatcactaatgagacctgccccaacacc
actactatgttgcacagaagcaatgatagctcagtgcctgaagagaaaacaaagaaaaag
ttaagaaaaagtcagtggtcccagctttccctgaaatcatttttccagaaaagttcgaac
atcagcaatagttctgaacactcttcaatggatgtttcacttagtcaagcagatgtggcc
gactctaatagtcacccaaatgaaactgttgctaaggatggtcaaatcagctctgccaaa
cattatgaatcaattacggaccctcaggatcagaacgaggtaaatcagaacgaggtaaat
tatggcccttcagacaaagagaaaaacaatgttgctttacaggagtggaaaaggatacaa
caactcatgcagaatagcgtacctctgtgcaagggccataaggaaccgtgtgttgctcgg
atagtgaagaaaccaggtcctacttttggccgcagattttatgtctgtgctcgagctgag
ggacctgcatccaatcctgaagctaattgtggctattttaaatgggcttcttcaaaatcc
cggcagaaatga
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