Manihot esculenta (cassava): 110602128
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Entry
110602128 CDS
T05761
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110602128
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110602128
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Helicases
110602128
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Med19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110602128
NCBI-ProteinID:
XP_021595249
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All DBs
Position
15:3636460..3643995
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AA seq
816 aa
AA seq
DB search
MAANSPPTQPSFSSKPSNKKRKGKGNRNPQDPELDRLDSLQWHRSLAEDDPFSAFAGSHE
LEGGFLSLEEIDEADYGLELPNVDKGKPEKSVKSKKRKHDVANDAIEEKVEEAEKAVGNE
EKKKKRKKKEKRKKKEKKKKANGTQKNEELTAVNVDSNGKDEDDDGGESIDETDFYAWNE
LRLHPSLMKSIYRLGFKEPTPIQKACIPAAAHQGKVSRVNVSEKVIFCETGSGKTLAFGL
PIFQRLLEERYKATKMFEELGGEAEKFAPKCLMRALIITPTRELALQVTDHLKEVAKGID
IRVVPIVGGMSTEKQERLLKARPEVIVGTPGRLWELMSGGEKHLAELHSLSFFVLDEADR
MIENGHFHELQSIIDMLPVANSSTEVERQSQNVQNCATLSTLQRKKRQTFVFSATIALSA
DFRKKLKRGLLKSKEEMTGGLNSIETLSERAGIRANAAIIDLTNASILAHKLEESFIECR
EEEKDAYLYYILSVHGQGRTIVFCTSIAALRHISALLRILGVHVWTLHAQMQQRARLKAM
DRFRTNEHGILIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARAFTDGCSIAL
ISPNDTSKFASLCKSFSKESFQRFPLEESYMPEVIKRLSLARQIDKIMRKNSQEKAKKTW
FERNAESVELIVEKDDSEDERVNNYKQKKITSMQLNKLQQELNMLLSRPLQPKTFSHRYL
AGAGVSPLLQHQLEELARQNSGNDLGGSKRRKLVVIGQDCVEPLQALRSAGHEVRMDVKE
MADKRKIIENLKRKRKEEKKRSRDQRRRQKKTMNTK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaattcgccgccgacgcaaccatcattctcctctaagccctcgaacaaaaag
agaaagggaaagggaaacagaaatcctcaggacccggaacttgaccggctcgactcgctt
caatggcaccggtctcttgcagaggatgatccattttctgcctttgctggctctcacgag
ctcgaaggaggttttctttctcttgaagagattgatgaggctgattacggtttagagctt
cctaatgttgacaagggaaagcctgagaaatctgtaaaatcaaagaaacggaagcatgat
gttgctaatgatgcaattgaagagaaagtggaggaagcagagaaggctgtggggaatgag
gaaaagaaaaagaagaggaagaagaaggagaagcggaagaagaaggagaagaagaagaag
gcaaatggaactcagaaaaatgaggaactcactgctgtgaatgtcgatagcaatggcaag
gatgaggatgatgatggtggagaatcgattgatgagactgatttttatgcgtggaatgag
ctgagacttcatccttcgcttatgaaatcaatatataggcttgggtttaaggagccaaca
ccgatccaaaaagcttgtattcctgctgcagctcatcaagggaaggttagtagggttaat
gtctctgagaaggttattttttgtgagactggttctggaaagacacttgcttttggtttg
cccatcttccaacggcttctggaggaaagatataaggccacaaaaatgtttgaagagttg
ggtggtgaagctgaaaagtttgccccaaaatgccttatgcgggcactgatcatcactcct
acaagggagcttgcgcttcaggttactgatcatcttaaggaagtagctaagggtattgac
attagggtggttcctattgttggtggaatgtcaacggagaagcaggaaagacttttaaag
gcaaggcctgaggttattgttggaactcctggtcgattatgggaacttatgtcaggagga
gaaaagcatcttgctgagttgcattcattgtctttctttgtgctggacgaagctgatcga
atgattgaaaatggacattttcatgagttgcagtcaataattgacatgctgcctgtggcc
aatagctccactgaagttgaacggcaatctcaaaatgtgcaaaattgtgcaactctctca
accctgcaaaggaagaaaagacaaacatttgttttttccgcaacaatagcattatctgcc
gattttcgcaagaagctaaagcgaggtttgctaaaatcaaaggaagaaatgactggagga
ttgaattctatagaaactctctccgaacgggcaggaataagagctaatgcagccataatt
gatttgacaaatgcatcaatcctggcacataagcttgaagaatcatttattgaatgcagg
gaagaagagaaagatgcttacctatactacatattgagtgttcatggacaaggtcgcaca
attgttttctgtacatcaattgcagctttgcgtcatatttctgccctcttgcgcattctg
ggagtacatgtttggacacttcatgctcagatgcagcagcgagctcgactgaaggcaatg
gatcgttttcgcacaaatgaacatggtatacttattgccactgatgttgctgctagaggc
cttgatattcctggtgttcgaactgttgttcactatcagctcccacattcagcagaagtc
tatgtccacagaagtggaagaactgctagagcttttactgatggatgcagcattgcttta
atctctcctaatgatacctcaaaatttgcctctttatgcaaatcattttcaaaggaaagt
ttccagagatttcctttagaggaatcatacatgcctgaggtgataaaacgactgtctctt
gcacgtcagatagacaagataatgcggaagaactcacaggagaaggcaaagaaaacctgg
tttgaacgaaatgcagaatcagttgagttaattgtggagaaggatgatagtgaggatgaa
agagtgaacaattataagcaaaagaaaatcacctccatgcagttgaacaaattacagcag
gagctcaatatgctgctttcacgtccattgcaaccaaaaacattttcacatcgatacttg
gcaggggccggtgtttcacctctcctgcaacaccagttagaagaattagctagacaaaat
tcgggcaatgatttgggaggaagcaaaagaaggaaactagtggttattggtcaggattgt
gtggagccactccaggcactccgaagtgctggtcacgaggtgcgcatggatgtgaaggag
atggcagataaacgaaaaattatagagaatttgaagcggaaaagaaaagaagagaagaaa
cgatcaagagatcagcggaggaggcagaagaaaaccatgaacacgaaatag
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