Manihot esculenta (cassava): 110602213
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Entry
110602213 CDS
T05761
Name
(RefSeq) RAN GTPase-activating protein 2 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110602213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110602213
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110602213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
110602213
NCBI-ProteinID:
XP_021595362
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Position
15:complement(2060322..2063420)
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AA seq
565 aa
AA seq
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MELNLWDKQLSAHEVKSIVVLYFAMDAATMKPQHRPFSIKLWPPSQNTRQMLVTRITGNL
TTKSIFTQKYGTLSKEEAEENAKKIEDVAFVTANQHYEMEPDGDGGSAVQLYAKECSKLI
LEVLKRGPAKKEEREVLVSEEPAASLNKVFDISKGPRSFIEASEAENILGPLKEPGNSYT
KICFSNRSFGPEAARVAQPILISMKDQLKEVDLSDFIAGRPEEEALEVMNIFSSALEGSI
LRSLDLSNNALGEKGVRAFGALLQSQSCLEELYLMNDGISEEAARAVCELIPSTEKLRIL
HFHNNMTGDPGALAISEVLKRSPLLEDFRCSSTRVGTEGGIALAEALETCTHLKKLDLRD
NMFGVEGGVALCKALSKHAGLTEIYLSYLNLEDEGAVAIANSLKESAPLLEVLDMAGNDI
TAEAAPDLSACIAVKQNLCKLNLSENELKDEGAIQISKALEGHIQLNEVDMNTNSLGRVG
ARVLAQVVVQKPKFKLLNIDANCISDEGIDEVKKIFKNSPDLLGPLDDNCPEGGDDDEEE
EYGEHDGDQHDLESKLSNLEVNRED
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaatctctgggacaaacagttgtccgcgcatgaagtaaaatcaatagtggtt
ctttattttgcgatggatgctgcaacaatgaagccgcaacaccgcccattttcaattaaa
ttatggccacctagccaaaacacaaggcaaatgcttgtgacgcgcattacaggaaatctc
actacaaagtcaattttcacccagaagtatggaactctgagcaaagaggaggctgaggaa
aatgcaaaaaaaattgaagatgttgcttttgtcactgcaaaccaacattatgaaatggag
ccagatggtgatggagggtctgccgtgcagctatatgcaaaggagtgtagtaagctaatt
ttggaagttcttaaaagaggccctgcaaaaaaggaggaaagagaagtcctggtttcagag
gaacctgctgcatcccttaataaagtttttgatatatctaaaggcccacgatcctttatt
gaggcatcggaggctgagaatatactagggccattaaaggaaccgggaaattcatatact
aagatatgctttagtaacagaagctttggtccggaagctgcccgtgttgctcagcccatt
ttaatttccatgaaggatcaattgaaggaagttgatttgtcagatttcattgctggaagg
ccagaggaggaagctctggaggttatgaatatattttcttctgctctggaaggtagcatt
ctaaggtctttggacctctcaaacaatgccttgggtgaaaagggtgtgagggcctttggg
gcactacttcaatcacagagttgcttggaggagctttatctaatgaatgatggcatttca
gaggaagctgcacgagcagtttgtgaattgattccttccacagagaagcttaggatcctt
catttccataataatatgacaggagatccaggggctcttgccatttctgaggttctgaaa
cgttctcccttactggaagattttcgatgctcttctacgagagtaggcacagaaggagga
attgccttggcagaagcacttgagacttgcactcatttgaagaagcttgacctgcgagac
aacatgtttggtgtggaaggtggagtcgctctgtgtaaagctctttccaagcatgcaggt
ctgactgagatttatttaagttatctgaatttggaagatgagggtgctgttgccatagcc
aattctctcaaggaatcggcacccctacttgaagtgttggacatggctggaaatgacata
acagctgaagctgctcctgatctgtccgcttgtatagcagtgaagcagaacctttgcaag
ttgaacttgtctgaaaatgagctgaaggatgaaggtgctatccagattagcaaggccttg
gaaggtcatattcagttgaatgaagttgatatgaacaccaattccttaggaagggttggg
gctcgggtcttggcacaagtggtggtgcagaagcccaagtttaaattgctgaatatagat
gcgaattgcatctctgatgaaggcattgatgaggtcaagaagatttttaagaattccccg
gacttgcttgggcccttggatgataattgtcctgaaggaggtgatgatgatgaagaagaa
gaatatggagagcatgatggtgatcagcatgacttggaatcgaaactgagtaatcttgaa
gttaacagagaggattaa
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