Manihot esculenta (cassava): 110602325
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Entry
110602325 CDS
T05761
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110602325
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110602325
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110602325
NCBI-ProteinID:
XP_021595506
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Position
15:complement(11460207..11463847)
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AA seq
556 aa
AA seq
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MAAASSSASFFRSREENQNQMMQQNSSTAAPTTVPQKKKRNQPGTPNPDAEVIALSPKTL
MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCVHHDPS
RALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
DSFITHRAFCDALAQESARHPSNLSTIGTHLYGSNHMSLGLSQVGSQISSLQDQNHPTSN
MLRLGSAGAAKFEHIIPPSNSSSLPSMPSSAFFMSDANQGSFPNKSLHGLIQLNDLQNTT
TNSSHTNLFNLGFFSNNAAAPSRMSNSDNANSSTTATNLVNSSFLNPNPFNNGNGGQGLF
SNNMGDHHVDSAGIPSLYSNSMQQENITPHMSATALLQKAAQMGSTTSSNNSNLLRGLGG
SPSTGTKSDRSPLVSANFSSNSFGNATVGDGGLGTQIEHDNQLQGLMNSLANGGSSIFGG
GHGQDNSFGGFTGSGISLEQLHNSTNFSNVEEAKLQQSLGVGSDKLTLDFLGVGEMVRSI
GGAQHGINLSSNNKPF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcctcatcatccgcttctttctttcggtctagggaggaaaatcaaaaccag
atgatgcaacagaattcatccacagctgctccaaccactgttcctcaaaagaaaaagaga
aatcaacctggaacaccaaatccagatgcagaggtgatagcgctgtctcccaagacccta
atggcaacaaataggttcatatgtgaagtatgcaacaaagggtttcaaagggagcaaaac
ttacagcttcacagaagaggacacaacctgccttggaagctaaagcagaagactacaaaa
gaagtgaagaggaaggtctatttatgccctgagcccacatgcgttcaccacgatccttct
agggctctcggtgaccttactggtatcaaaaagcactactctagaaaacatggcgagaag
aaatggaagtgtgagaagtgctctaagagatacgccgttcaatctgattggaaagcccat
tcaaagacctgtggcacaagagagtacagatgtgactgtggcactctcttctcaaggcgt
gatagtttcatcacccatagagctttctgtgacgcattggctcaggagagcgcacggcat
cctagcaacttaagcaccataggtactcatctctatggaagtaaccacatgagcttaggc
ctatctcaagtgggttctcaaatttcatcattgcaagatcagaatcacccaactagtaat
atgttgcggctgggaagcgctggggctgcgaaattcgagcacattatccctccatccaac
tcctcgtccttgccatcaatgccttcttctgccttcttcatgtcagatgcaaatcaaggt
tcattcccaaataaatccttacatgggctaatacaactcaatgaccttcaaaataccacc
accaactcctcccataccaatctcttcaatcttggcttcttttcaaataatgctgctgcc
cccagccgaatgagtaacagcgacaatgccaactcaagcaccacagccaccaacttggtg
aattcaagcttcttgaatccaaatccattcaacaacggaaatggtggtcaaggtctcttc
tccaacaacatgggtgatcatcatgttgactcagctggcatcccttctctttatagcaat
tcaatgcagcaagaaaacatcactccacacatgtctgccacagctttgcttcaaaaagct
gctcaaatgggttcaactactagcagcaacaactctaatcttctaagaggccttggaggt
tctccatcaaccggcactaaatccgatagatcaccacttgtttctgctaactttagcagc
aacagttttggaaatgcaactgtaggggatggtggcctaggaacgcagatagaacatgac
aaccaacttcagggattgatgaattctcttgccaatggcggctcttccattttcggcggc
ggacatgggcaagataacagcttcggtgggtttacaggcagcggcatctcattggaacaa
cttcataatagcacgaattttagcaatgtagaggaagcaaaattgcaacaaagtcttggg
gttggatcagataagctgaccttagattttcttggggtcggagaaatggtaagaagcatt
ggtggagctcaacatggcatcaatttaagctcaaataataaacctttttga
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