KEGG   Manihot esculenta (cassava): 110602533
Entry
110602533         CDS       T05761                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110602533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110602533
Membrane trafficking [BR:mesc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    110602533
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 PEP5_VPS11_N Beta-prop_WDR35_TULP_N KNTC1_N eIF2A CFAP43_N Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st OppC_N
Other DBs
NCBI-GeneID: 110602533
NCBI-ProteinID: XP_021595766
LinkDB
Position
15:complement(10260509..10266493)
AA seq 403 aa
MGKGKKPDPPSLQKYGVPFYSAAWVPYKEVRSKLQPQDPHHPDDKDEDSGKENPPPASQQ
EIADQYYLVLAGGGGEGRSGIPNAIVLSHFDFASNSLSAQPVAKLGLGSDLPYRMAVHPG
GDGLICALPKSCRLFNWDEVKDNDAQKLDIKESVKVLTQLEDIGQQLALAFNSDGSVLAV
GGEDGYLRVFKWPSMEIILNEAEAHASLRHLCFSPDGKFLVSLGSRGPGRVWDMTSSTVV
ASLSKDNDEVFASCKFSQSSDKTQVLYIAAITGKGGSIQTWDTSSWKRIGSKQISRDSVS
SFNVSPDGKFLAMGTVQGDVLIINSASMRIQMVVRKAHLGMVTALAFSHDSRALVSASMD
SSARVTPIEDEKNGGLSLWIILVIILLAIAAYFLKKGLAAFLG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgggaaagggcaagaagccggaccctcctagcttgcaaaaatacggcgtccccttctac
tctgctgcttgggttccctacaaagaagttagatccaagcttcaacctcaggatcctcat
catcccgacgacaaagatgaagattcaggcaaggaaaatccacctcctgcatctcagcag
gagattgccgatcaatactacctcgttcttgccggtggtggcggagaaggccgcagcggc
atccctaacgctatcgttctctctcatttcgatttcgcctccaattctctctctgcccag
cctgtagctaagcttggacttggttctgatttgccttatagaatggctgttcacccaggt
ggagatgggctgatttgtgcattgccaaaaagctgtcgacttttcaactgggatgaagtt
aaggacaatgatgcccagaaattggatataaaagagtcggtaaaagtgctcacccaacta
gaagacattggacagcagttagcattggcctttaacagtgatggttctgttcttgctgtt
ggtggcgaggatggctatttaagggttttcaagtggcccagcatggaaattattctcaat
gaggctgaagctcatgcttccttaaggcatttatgtttcagccctgatgggaaatttctt
gtctccttgggaagtcgtggccctggaagggtttgggatatgacttcttcaacagtagta
gcttctttatcaaaggacaatgatgaggtctttgcgtcatgcaaattttctcaaagcagt
gataagacccaggttctttacattgctgcaataacaggcaaaggtggaagtattcagaca
tgggacacaagctcgtggaagaggattggttcaaagcaaatcagtcgtgattcagtttct
tccttcaatgtttctcctgatggaaagttccttgcaatgggtacagttcaaggagatgta
ctgattataaattcagccagcatgcggattcaaatggtggttagaaaagcacaccttggc
atggtaacagcattggcgttctcgcatgattcaagggctttggtgtctgcatccatggac
tcaagtgcgagggtgacgcccattgaggacgagaaaaacggaggtttaagcttatggatc
attttagtcataattttacttgcaattgctgcttatttcctgaagaaaggacttgctgct
tttcttggatag

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