Manihot esculenta (cassava): 110602582
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Entry
110602582 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110602582
00071 Fatty acid degradation
110602582
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110602582
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110602582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110602582
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110602582
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110602582
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110602582
Exosomal proteins of breast cancer cells
110602582
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110602582
NCBI-ProteinID:
XP_021595829
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Position
15:2127885..2140162
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AA seq
693 aa
AA seq
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MGSAQRRIQAINSHVIAAVDTPSQLRLKPAAGEFFSEQGYSVVLPEKLQTGKWNVYRSVR
SPHKLVSRFPDNPDIGTLHDNFTRSVDAFRDYKYLGARIRIDGKIGEYKWMTYGEAGTER
TRIGSGLRYQGMSNGSCIGLYFINRPEWLLVDHACSAYSFISVPLYDTLGPDAVKYIANH
ADIRAIFCLPQILTPLLSFLSEISTVRLIVVVGGMEDQMPSLSSSTGVQVITYSKLLSQG
RSNPHPLSPPKPEDVATICYTSGTTGTPKGVTLTHGNLIAHVAGLSVKANFYTSDVYLSY
LPFPHIYERAFQVLLAYYGVAVGFYQGDTTKLMDDAAALRPTIFCSVPRLYNRIYTSIIN
SVKTSGALRERLFNAAYNAKKQALLNGESPSPMWDRLVFNKIRERLGGRVRYMGSGASPL
SPDVMEFLKICFGCRVTEGYGMTETSCVISNVDEGDNLTGHVGSPNPACEIKLVDVPEMK
YTSEDQPYPRGEICVRGPTVFQGYHKDEAQTREIIDEDGWLHTGDIGLWLPEGRLKIIDR
KKNIFKLAQGEYIAPEKIENIYAKCKFIAQCFVYGDSLNSSLVAVVSVDRAILKAWAASE
GIKYDSLEQLCNNPRARAAVLADMDVLGREAKLRGFEFAKAVTLVAQPFSIEKGFLTPTL
KIKRPQAKAFFEKEISKMYAELATSVPSSKGKL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagctcaacgtcgcattcaagccatcaactcccatgttattgctgccgtcgac
actccttctcagctccgtctcaaacccgcagctggcgagtttttctctgagcagggttac
agtgttgtgcttccagagaagttacagacgggaaaatggaatgtatacaggtctgtccgt
tctcctcataagcttgtgagcagatttcctgataatcctgatattggtacattgcatgat
aattttacgcggtctgttgatgctttccgtgattacaaatatctgggagcacgaattcgg
attgatggaaaaattggagagtataaatggatgacatatggagaagcaggtactgagcgg
acaagaattggttctggcctaaggtatcagggaatgtcaaatggatcttgtattggatta
tattttatcaacagaccagaatggctccttgttgatcatgcctgctctgcgtactctttt
atatcagttcctttatatgacactctcggtccagatgctgtcaagtacattgcaaatcat
gctgatatacgggctatattttgtttgccccaaattttgacccctttgctgagtttcttg
tctgaaatttcaactgttcgtctgattgtggttgttggagggatggaggatcaaatgcca
tctctttcatcatcaactggagttcaggttataacatattcaaaacttcttagtcagggc
cgcagtaatcctcatcctctttctccgccaaaacctgaagatgttgctacaatttgctac
acaagtggtacaacagggacaccaaagggagtcacattgacccatggaaacttgattgca
cacgttgctggactcagtgttaaggctaatttttacacatcagatgtctacttgtcatat
cttcctttcccacacatttatgaaagggcattccaggtcttgttagcatattacggagtt
gctgttggattctatcagggagatactacgaagctaatggatgatgcggctgctctaaga
cccacaatcttttgcagtgttcctcggctgtataatagaatatatactagcattataaat
tcagtaaagacatctggtgctttaagggaaaggttattcaatgctgcctacaatgctaag
aagcaggcacttctgaatggcgagagtccatctccaatgtgggacagattggtgttcaat
aagataagggagagacttggtggaagagttcgttacatgggatctggtgcttcacccttg
tctcctgatgtcatggagttcttgaagatctgctttggttgccgtgtaactgaaggatat
ggaatgactgagacttcttgtgttataagcaacgtagatgagggtgacaacctaactggt
catgttggttctcctaatccagcctgcgaaataaaacttgtggatgttcctgagatgaag
tacacgtctgaggatcagccctatcctcgtggggaaatctgtgtgagaggtcccactgtt
ttccaaggctatcataaagatgaagcacagacgagagaaataattgatgaagatggatgg
cttcacaccggagacataggactatggttacccgagggtcgtctgaagattattgatagg
aagaagaacatttttaagctggcacagggagagtacatagccccagagaaaattgagaat
atatatgctaaatgcaaatttattgcccagtgctttgtgtatggggacagccttaactcc
tctctggtagccgttgtttcagtggaccgagctattttgaaagcatgggctgcttctgaa
ggcattaagtatgacagtttggagcaactatgcaataatccaagagcaagggcagctgtc
ctcgcagacatggatgttcttggaagagaagcaaagctccgaggttttgaatttgcaaaa
gctgtgactcttgtggcgcaaccattttcaatagagaaaggttttttgactccaacatta
aagataaagagacctcaagcaaaggcattctttgaaaaggaaatatcaaaaatgtatgcg
gagcttgccacatctgttccatcctccaaagggaagttgtga
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