Manihot esculenta (cassava): 110602735
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Entry
110602735 CDS
T05761
Name
(RefSeq) protein transport protein sec23-1
KO
K14006
protein transport protein SEC23
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110602735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110602735
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110602735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110602735
NCBI-ProteinID:
XP_021596022
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Position
15:2846539..2850010
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AA seq
790 aa
AA seq
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MDFVELEAIEGLRWSWNAWPTTKNEVASLIIPLSIMCTPLMQSSELPILPYEPLTCTRCG
AILNPYARVDYQSRIWGCPFCYQKNSFPISYSGIGEANLPAELFPTYSTVEYKIDKIDTK
FASSSHLGYSWANGLSSSNTSLSSMTSLGTPRIAAGVGGGGELKGIGPAFVFVVDACTAE
EELRAVKNELLLVIEQLPENALVGLVAFDSMVRVYDLGFSECSRVVVFHGEREISSEQIQ
QFLGVRSTKLQQLGKKPFVQNPGFLLPISECEFNITTAVEEICSLAVVMPGHRPQRCTGA
AISVAVGLLEGCSVLTGSRIMVFTSGPATLGPGMIVDSDLSNAIRTHRDLINGHASHYRK
SCSFYSRLSQRLSDASVVLDLFACSLDQVGAAELKAPVERSGGFMMLGELFESDQFRKCL
RHIFGRDEEGSLKMYFDATIEVITTKDVKICGALGPCVSLRKNNGLVSDRETGEGGTYAW
KLGTLTNKTCLTFLFEVGDEQKAHPGSAFFIQFITRYRHGNMGIRKRVTTAARRWVGNKS
AEITSGFDQEAAASVMARLAIHRAETCYARDVVRWLDDNLICFASKFGDYIQEDASTFRL
STNFSLYPQFMYYLRRSQFIDVFNSTPDETAFFHLMLNREGVVGSLIMIQPTLFQYSFDG
PPIPVLLDVRSISRDVILLFDSYFHVVIHYGSKIAQWRKLGYHKDPNHENLRKLLEAPEI
DAEQLVVERVPAPKLIKCDQHSSQARFLLAKLNPSVTQNSTYTEGSEIILTDDLSLQDFI
DHLQTLAVKA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtagagctggaggcgatcgagggactgcgttggtcctggaacgcatggccc
acgacgaagaatgaagtcgcgtcccttataattccacttagcatcatgtgcacgccactg
atgcaatcttcagagctcccaattctcccgtatgaaccccttacttgtactcgatgcggc
gctatcttaaacccttacgctcgcgtggattaccagtctcgcatttggggttgtcccttc
tgctaccagaaaaattcttttccgatttcttactcgggtattggcgaagctaatcttcca
gcagaactttttcccacttatagcaccgtagaatacaaaatcgataagatcgataccaaa
tttgcttccagttcgcatttgggttatagttgggcaaatggtttgtcttcatctaataca
tctttgtcgtcgatgacatcattggggactccgagaatagcagctggtgtaggtggtggt
ggggagttgaaggggattggacctgcgtttgtgtttgtggtggatgcgtgtacagccgaa
gaggagctgagggcggttaaaaatgagcttttgttggtcattgagcagttaccagaaaat
gcgctggtcggcttggttgcgttcgattcaatggttagggtttatgatctgggattctcg
gagtgctcgagggtggtggtgttccatggtgaacgtgagatttcatcggagcagatacaa
caatttctgggtgtacgtagcaccaaattgcagcaacttggaaaaaaaccatttgttcag
aatccgggatttttgctgcctatatctgaatgtgagttcaatattactacagcagttgaa
gaaatttgttccttagcagtagtcatgcctggtcatcgacctcaaaggtgcactggagca
gcaatatcagttgcagttggacttcttgagggatgttcagtgcttacaggttcaaggatt
atggtcttcacttctggccctgcaacattgggccctgggatgattgtggattcagatctt
agtaatgccattagaactcatagagacctcatcaatggtcatgcttctcactatagaaaa
tcttgcagcttctatagtaggttatctcagagattatctgatgcatctgttgttcttgat
ttatttgcttgttcccttgatcaagtaggagcagcagagctaaaagccccagttgagagg
tctggcggattcatgatgttaggagagctatttgagtctgatcaattcagaaaatgcctg
cggcacatttttggtcgtgatgaagaagggagtttgaagatgtattttgatgcaacaatt
gaggtgatcaccacaaaagacgtaaagatctgcggagcacttggaccttgtgtttctctt
aggaaaaataatggtttagtgagtgaccgtgagactggggagggtggcacttatgcatgg
aagttgggcacactaactaataaaacatgcttaactttcttatttgaagtgggtgatgag
cagaaggcccatcctgggtctgccttttttatacagtttataacacgttaccgacatgga
aacatgggaatccggaaaagggttaccacagctgcaagaagatgggtcggcaataagtct
gcagaaatcacttccggttttgatcaggaagcagcagcttcagtcatggccagacttgcc
attcaccgagcagaaacatgctatgctcgagatgtcgtgagatggctggatgacaatctt
atttgttttgcttccaagtttggtgactatatccaagaagatgcatcgaccttccgctta
tcaacaaacttctctctttaccctcagttcatgtattatttaaggaggtcccaatttata
gatgttttcaacagtactcctgatgaaactgcattcttccacctgatgttgaaccgtgaa
ggagttgttggttcccttatcatgatacaacctacactttttcagtattctttcgatggc
cctccaattccagtcctcctagatgttcgatccatctcacgtgatgttattttgctcttt
gattcttacttccatgtggtgattcattatggatccaagattgctcagtggaggaaactt
ggctatcacaaagatccaaaccatgagaatttgagaaagctgctggaagctcctgaaatt
gacgcagagcaattggtggtagaacgagttcctgcaccaaaactgataaaatgtgaccaa
cacagtagtcaggccaggttccttcttgctaagttgaatccatccgttactcagaactca
acatacacagaaggatcagaaatcatactcactgatgatttgagcttgcaagattttata
gatcacttgcaaaccctggcagtgaaggcttaa
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