Manihot esculenta (cassava): 110602831
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Entry
110602831 CDS
T05761
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110602831
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
110602831
NCBI-ProteinID:
XP_021596101
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Position
2:complement(11667635..11672683)
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AA seq
677 aa
AA seq
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MSGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLA
HLGSSLRSLGTTLVTKRSTDSVSALLEVVKSTGATQLFFNHLYDPLSLVRDHRAKELLTA
QGVAVRSFNADLLYEPWEVNDAQGSPFTTFGEFWERCLSMPYDPEAPLLPPKRIISGDIS
RCPSNLLIFEDESEKGSNALLARAWSPGWSNADKALMTFINGPLIEYSKNRRKADSATTS
FLSPHLHFGEVSVRKVFHLVRMKQVLWANDGNKAGEESVNLFLKSIGLREYSRYLSFNHP
YSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRLVVSSF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDP
NGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPVVWIDAAKVRLQEAL
SEMWQQEAASRAAIENGTEEGLGDSSESALIAFPQDILMEERHEPVRNNLPSTIRRYEDQ
MVPSITTSLLRVEEEETSSDLRNVTEDTRAEVPRNVNINQEQRRDNLNLGAAQTIRENNL
AHFSVVRSLGIEDSTEESSSSSRRERDGGIVPVWSPPSASYSEQFAGDENGIGTSPYLQR
HPQSHQILNWRRLSQTG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgggtgtagcatagtctggttcaggagagatctgagggtagaggataatcca
gcacttgcagctggtgtaagagctggtgctgttgttgcagtgtttatatgggcacctgaa
gaagaaggccattattaccctggtagggtctcaaggtggtggctcaagcaaagtttggct
catttaggctcttctttgaggagccttggaactacccttgtcaccaagagatctactgat
agtgtttctgctctgcttgaggttgtcaaatctactggtgctacccagctcttcttcaac
cacttatatgaccccttgtcactggttagggatcaccgggcaaaggagcttttgactgct
caaggagtagctgtgagatcctttaatgcagatttgctttatgaaccgtgggaagttaat
gatgcacagggaagccctttcacgacttttggtgaattctgggaaagatgccttagcatg
ccttacgatccagaggctccacttctcccacccaaaaggattatttcaggtgatatatca
agatgtccgtctaacttattgatatttgaagatgaatcagagaagggaagcaatgcgctg
cttgctcgagcatggtcacctgggtggagcaatgctgataaggctttgatgacattcatc
aatggaccactaattgagtactctaagaatcgtaggaaggctgacagtgctacaacctcc
tttctctctccccatttgcattttggggaggttagtgtcagaaaggtttttcaccttgtt
cgcatgaagcaggttctttgggcaaatgatgggaacaaggctggtgaagagagtgtaaac
ttgtttcttaagtcaattggtttgagggaatattcaagatacctgagttttaaccatcct
tacagtcatgaacgtcctcttcttgggcaccttaaatttttcccttgggttgtagatgaa
ggctattttaaagcttggagacaaggaagaactggttacccattagttgatgcaggaatg
agagagttgtgggccactggctggctgcatgatcgaataagattagtagtttctagtttc
tttgtgaaggttctacagcttccttggaggtggggaatgaagtatttctgggataccctc
ttggatgctgatttagaaagtgatgcacttggttggcagtacatatctggtactcttcct
gatggtcgagagtttgatcgcatagataatccgcagtttgagggttacaaatttgatcca
aatggagaatatgtacgaaggtggcttccagaacttgccagactacctactgaatggata
caccatccatggaatgcacctgaatctgtactccaagctgccggaattgagctcggatca
aattatcctctcccagtagtatggatagatgctgctaaagttaggttgcaagaagcgctt
tcagaaatgtggcagcaagaagcggcttcaagagctgccattgagaatggaacagaggaa
gggcttggagactcatctgaatcagccttaattgcattccctcaagatatactaatggaa
gaaagacatgaacctgtaagaaataaccttccttccacaatccggcgttatgaggatcag
atggtcccaagcatcactacttccttgctaagagttgaagaggaagaaacttcttcagat
cttcggaatgtaacagaagataccagagcagaggtgccaagaaatgtaaatatcaatcaa
gaacaaagaagagacaacttaaacctgggggctgcacaaactatccgcgaaaacaatttg
gcacattttagtgttgtcagaagtctaggtattgaagattcaacagaagaatcttcaagt
agtagtaggagagagagagatggaggcatagttccagtgtggtcccctccatctgctagt
tactcagagcagtttgctggtgatgaaaatggaattggaacaagtccttatttgcagagg
catccacagtcccaccagatactgaattggaggcggctgtctcagactgggtaa
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